RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 F7P08709 466 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACAA1P09110 424 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GNAO1P09471 354 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CLTAP09496 248 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 WNT2P09544 360 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TACSTD2P09758 323 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ACSM4P0C7M7 580 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TMEM191BP0C7N4 346 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CISD3P0C7P0 127 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 THEGLP0DJG4 465 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ERVK-10P10266 1014 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ITGAMP11215 1152 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MTHFD1P11586 935 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TDGF1P13385 188 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FDPSP14324 419 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ATF2P15336 505 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PNLIPP16233 465 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CPEP16870 476 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF18P17022 549 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ITIH2P19823 946 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ITIH1P19827 911 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD33P20138 364 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CD22P20273 847 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDH3P22223 829 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GATA3P23771 443 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ATP5F1P24539 256 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CNTFRP26992 372 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LOXP28300 417 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRKAR2BP31323 418 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CYP2C19P33261 490 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GJC1P36383 396 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NUDT1P36639 197 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SREBF1P36956 1147 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARHGAP25P42331 645 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MTHFRP42898 656 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC6A8P48029 635 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AMTP48728 403 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GZMMP51124 257 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RENBPP51606 427 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 USP11P51784 963 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CLCN5P51795 746 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HNRNPMP52272 730 aaKnown RBP eCLIP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PMS2P54278 862 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 EPHA5P54756 1037 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DVL1P1P54792 670 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DSCR9P59020 149 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RPS8P62241 208 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RAE1P78406 368 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ADORA2A-AS1P86434 159 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SHC2P98077 582 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FOXO4P98177 505 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DSG1Q02413 1049 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PAX2Q02962 417 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TFF2Q03403 129 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TLE3Q04726 772 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LTBQ06643 244 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RBL2Q08999 1139 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARL16Q0P5N6 197 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C19orf57Q0VDD7 668 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC10A2Q12908 348 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BAMBIQ13145 260 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TARDBPQ13148 414 aaKnown RBP eCLIP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRDX4Q13162 271 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PPIGQ13427 754 aaKnown RBP eCLIP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GAB1Q13480 694 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MTMR1Q13613 665 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NCOA4Q13772 614 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RUNX2Q13950 521 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TOB2Q14106 344 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 VEZF1Q14119 521 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RRP1BQ14684 758 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HEPACAMQ14CZ8 416 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PTGES3Q15185 160 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TSC22D1Q15714 1073 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ELF2Q15723 593 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AANATQ16613 207 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TAZQ16635 292 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RNF151Q2KHN1 245 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C15orf32Q32M92 178 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MINDY4Q4G0A6 757 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CDONQ4KMG0 1287 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TMEM119Q4V9L6 283 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C4orf46Q504U0 113 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 INO80DQ53TQ3 878 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PAN3Q58A45 887 aaKnown RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPINK9Q5DT21 86 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF789Q5FWF6 425 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CEP78Q5JTW2 689 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SPECC1Q5M775 1068 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM26FQ5R3K3 315 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRR31Q5SQ13 230 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MARCH8Q5T0T0 291 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HES3Q5TGS1 186 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AGAP7PQ5VUJ5 663 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AGAP6Q5VW22 663 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RNLSQ5VYX0 342 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 E4F1Q66K89 784 aaPredicted RBP-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KAZNQ674X7 775 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PLA2G4FQ68DD2 849 aa-0.67□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SMYD5Q6GMV2 418 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms