RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CXADRP78310 365 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 HMGN5P82970 282 aaKnown RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 TEAD4Q15561 434 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 INAVAQ3KP66 663 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 TAF1BQ53T94 588 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 NUP93Q8N1F7 819 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 SCAMP5Q8TAC9 235 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 OVCA2Q8WZ82 227 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 RAD54LQ92698 747 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 PRCCQ92733 491 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 SIPA1Q96FS4 1042 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 ANKRD36BP1Q96IX9 119 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 DUSP9Q99956 384 aaKnown RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 MRPL45Q9BRJ2 306 aaKnown RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 DPEP3Q9H4B8 488 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 CLMPQ9H6B4 373 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 WDR35Q9P2L0 1181 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 CHORDC1Q9UHD1 332 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-231ENST00000515620 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 ANKRD6Q9Y2G4 727 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
CLDND1-231ENST00000515620 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 H0Y8X5 98 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 PCDHGA12O60330 932 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 SYNCRIPO60506 623 aaKnown RBP11.11□□□□□ -0.63
CLDND1-231ENST00000515620 PPP1R37O75864 691 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 LDHAP00338 332 aaKnown RBP11.11□□□□□ -0.63
CLDND1-231ENST00000515620 ACADMP11310 421 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 UBA7P41226 1012 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 IL12RB1P42701 662 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 TUBP50607 506 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 SLC5A3P53794 718 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 HTR3DQ70Z44 454 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 TMPRSS6Q8IU80 811 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 OR5B17Q8NGF7 314 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 IGSF8Q969P0 613 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 NUP58Q9BVL2 599 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 C6orf106Q9H6K1 298 aaPredicted RBP11.11□□□□□ -0.63
CLDND1-231ENST00000515620 TM9SF3Q9HD45 589 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 SPTA1P02549 2419 aa11.11□□□□□ -0.63
CLDND1-231ENST00000515620 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 CBX4O00257 560 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 SLC26A4O43511 780 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 GREM1O60565 184 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 TLR5O60602 858 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 IGLV3-19P01714 112 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 TNNC2P02585 160 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 GNL1P36915 607 aaPredicted RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 GRIA4P48058 902 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 TLE3Q04726 772 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 TARDBPQ13148 414 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 HES3Q5TGS1 186 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 SNX30Q5VWJ9 437 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 ARL6IP4Q66PJ3 421 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 LARP4BQ92615 738 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 AK8Q96MA6 479 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 KCNK16Q96T55 309 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 ARID3AQ99856 593 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 B3GNT5Q9BYG0 378 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 TBC1D7Q9P0N9 293 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 LSM7Q9UK45 103 aaKnown RBP11.1□□□□□ -0.63
CLDND1-231ENST00000515620 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
CLDND1-231ENST00000515620 ENC1O14682 589 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 BRINP1O60477 761 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 RFPL3O75679 317 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 GCNT3O95395 438 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 GARTP22102 1010 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 PGFP49763 221 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 ZNF132P52740 706 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 COPAP53621 1224 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 CDH8P55286 799 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 DNAJC3Q13217 504 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 RTP5Q14D33 572 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 USP49Q70CQ1 688 aa11.09□□□□□ -0.63
CLDND1-231ENST00000515620 ADAT2Q7Z6V5 191 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms