RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 HMBSP08397 361 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 MRPS21P82921 87 aaKnown RBP25.69■■□□□ 1.7
SNF8-213ENST00000514929 CNGA2Q16280 664 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 PKDCCQ504Y2 493 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 TPGS1Q6ZTW0 290 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 SFTPA1Q8IWL2 248 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 ETFBKMTQ8IXQ9 262 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 CCDC33Q8N5R6 958 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 KCTD13Q8WZ19 329 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 NDRG1Q92597 394 aaKnown RBP25.69■■□□□ 1.7
SNF8-213ENST00000514929 KREMEN1Q96MU8 473 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 BBS2Q9BXC9 721 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 UBE2TQ9NPD8 197 aaPredicted RBP25.69■■□□□ 1.7
SNF8-213ENST00000514929 MARCH2Q9P0N8 246 aa25.69■■□□□ 1.7
SNF8-213ENST00000514929 ANTXRLA6NF34 631 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 NEDD8-MDP1E9PL57 170 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 CALCAP01258 141 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 KRT5P13647 590 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 CLEC17AQ6ZS10 378 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 NUDT18Q6ZVK8 323 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.68■■□□□ 1.7
SNF8-213ENST00000514929 XPO6Q96QU8 1125 aaKnown RBP25.68■■□□□ 1.7
SNF8-213ENST00000514929 CRACR2AQ9BSW2 395 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 DCLK3Q9C098 648 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 WDR35Q9P2L0 1181 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 GPR179Q6PRD1 2367 aa25.68■■□□□ 1.7
SNF8-213ENST00000514929 A0A0A0MRY4 1105 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 TBC1D3BA6NDS4 549 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 AXIN1O15169 862 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 RPP40O75818 363 aaKnown RBP25.67■■□□□ 1.7
SNF8-213ENST00000514929 LCP1P13796 627 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 TIE1P35590 1138 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 TNFRSF4P43489 277 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 MTIF2P46199 727 aaKnown RBP25.67■■□□□ 1.7
SNF8-213ENST00000514929 RGS7P49802 495 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 ZNF132P52740 706 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 Q6ZNB5 142 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 BHLHA9Q7RTU4 235 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 PHTF2Q8N3S3 785 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 ALLCQ8N6M5 410 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 GPR161Q8N6U8 529 aaKnown RBP25.67■■□□□ 1.7
SNF8-213ENST00000514929 TSTD1Q8NFU3 115 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 RNF139Q8WU17 664 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 SLC35F5Q8WV83 523 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 GAB3Q8WWW8 586 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 ZSWIM1Q9BR11 485 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 CNGB3Q9NQW8 809 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 OLA1Q9NTK5 396 aaKnown RBP25.67■■□□□ 1.7
SNF8-213ENST00000514929 DNAJC17Q9NVM6 304 aaKnown RBP25.67■■□□□ 1.7
SNF8-213ENST00000514929 DACH1Q9UI36 760 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 MMP17Q9ULZ9 603 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 ZNF510Q9Y2H8 683 aa25.67■■□□□ 1.7
SNF8-213ENST00000514929 SLC12A8A0AV02 714 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 TYRP14679 529 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 DPCR1Q3MIW9 517 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 GRAMD4Q6IC98 578 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 TRIM65Q6PJ69 517 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 GBP6Q6ZN66 633 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 IRF2BP1Q8IU81 584 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 LMBRD1Q9NUN5 540 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 MARK1Q9P0L2 795 aa25.66■■□□□ 1.7
SNF8-213ENST00000514929 YJEFN3A6XGL0 299 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 E7ENQ6 273 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 KLF8O95600 359 aaPredicted RBP25.65■■□□□ 1.7
SNF8-213ENST00000514929 KLKB1P03952 638 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 RETP07949 1114 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 CORO1AP31146 461 aaKnown RBP25.65■■□□□ 1.7
SNF8-213ENST00000514929 MFAP3P55082 362 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 HSF5Q4G112 596 aaPredicted RBP25.65■■□□□ 1.7
SNF8-213ENST00000514929 EMC10Q5UCC4 262 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 BSPRYQ5W0U4 402 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 PMF1Q6P1K2 205 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 ENOSF1Q7L5Y1 443 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 TERB1Q8NA31 727 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 TXNDC5Q8NBS9 432 aaKnown RBP25.65■■□□□ 1.7
SNF8-213ENST00000514929 EDEM1Q92611 657 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 BHMTQ93088 406 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 THAP9Q9H5L6 903 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 EBF1Q9UH73 591 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 CNTN6Q9UQ52 1028 aa25.65■■□□□ 1.7
SNF8-213ENST00000514929 PIK3R2O00459 728 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 CACNG3O60359 315 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 SLC9A1P19634 815 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 KIR2DL1P43626 348 aaPredicted RBP25.64■■□□□ 1.7
SNF8-213ENST00000514929 DGKEP52429 567 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 DAOAP59103 153 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 C10orf76Q5T2E6 689 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 FAM114A1Q8IWE2 563 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 SCML4Q8N228 414 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 FAM160A2Q8N612 972 aaPredicted RBP25.64■■□□□ 1.7
SNF8-213ENST00000514929 IL17RCQ8NAC3 791 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 FAM81BQ96LP2 452 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 GBP4Q96PP9 640 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 ABCC13Q9NSE7 274 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 USP18Q9UMW8 372 aa25.64■■□□□ 1.7
SNF8-213ENST00000514929 TRIM24O15164 1050 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 ERCC5P28715 1186 aaPredicted RBP25.63■■□□□ 1.69
SNF8-213ENST00000514929 CHKAP35790 457 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 ID4P47928 161 aa25.63■■□□□ 1.69
SNF8-213ENST00000514929 CRY1Q16526 586 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms