RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 AP3M2P53677 418 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 SP2Q02086 613 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 NOMO1Q15155 1222 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 DUOXA2Q1HG44 320 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 FAXCQ5TGI0 409 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 MARK2Q7KZI7 788 aaKnown RBP18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 FAM83AQ86UY5 434 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 XYLT1Q86Y38 959 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 NSUN6Q8TEA1 469 aaKnown RBP18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 RSAD1Q9HA92 442 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 CIDEBQ9UHD4 219 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 ZNF180Q9UJW8 692 aa18.8■□□□□ 0.6
TNFRSF8-205ENST00000514649 FAM189A1O60320 539 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 TFAMQ00059 246 aaKnown RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 CDC16Q13042 620 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 ORC1Q13415 861 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 DBN1Q16643 649 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 SH3PXD2AQ5TCZ1 1133 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 LGSNQ5TDP6 509 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 WDR78Q5VTH9 848 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 FKBP1CQ5VVH2 108 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 C1orf228Q6PIY5 440 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 ZCCHC23Q6ZST2 131 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 SNRNP27Q8WVK2 155 aaKnown RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 SLC7A3Q8WY07 619 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 KCNN1Q92952 543 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 PEBP4Q96S96 227 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 USP29Q9HBJ7 922 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 POPDC2Q9HBU9 364 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 PREBQ9HCU5 417 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 NXF1Q9UBU9 619 aaKnown RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 MEI4A8MW99 385 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 PABPC4LP0CB38 370 aaKnown RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 RAP1GAPP47736 663 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 MTMR2Q13614 643 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 ZNF699Q32M78 642 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 RAB6CQ53S08 254 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 CAND1Q86VP6 1230 aaKnown RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 ST13P4Q8IZP2 240 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 NME8Q8N427 588 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 GSTCDQ8NEC7 633 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 PPP2R3CQ969Q6 453 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 RAB6CQ9H0N0 254 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 LHX5Q9H2C1 402 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 ZNF302Q9NR11 478 aa18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 HBS1LQ9Y450 684 aaKnown RBP18.79■□□□□ 0.6
TNFRSF8-205ENST00000514649 A0A088AWK7 358 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 SNNO75324 88 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 SERPINA6P08185 405 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 PRKCHP24723 683 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 CCNFP41002 786 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 CDH6P55285 790 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 CAPSQ13938 189 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 MAP7Q14244 749 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 ACBD5Q5T8D3 534 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 TMCO4Q5TGY1 634 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 RAPH1Q70E73 1250 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 TRIM56Q9BRZ2 755 aaKnown RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 C1orf21Q9H246 121 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 TMEM134Q9H6X4 195 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 GPAMQ9HCL2 828 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 KCNN4O15554 427 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 BUD23O43709 281 aaKnown RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 RNASEH1O60930 286 aaKnown RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 TOP3BO95985 862 aaKnown RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 C6orf222P0C671 652 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 CPOXP36551 454 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 MROH9Q5TGP6 573 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 NDUFAF2Q8N183 169 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 HIC2Q96JB3 615 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 XYLT2Q9H1B5 865 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 EBF3Q9H4W6 596 aa18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 MAFBQ9Y5Q3 323 aaPredicted RBP18.78■□□□□ 0.6
TNFRSF8-205ENST00000514649 HMX2A2RU54 273 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 SPATA31C2B4DYI2 1134 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 TRDMT1O14717 391 aaKnown RBP18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 ADCY3O60266 1144 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 BPGMP07738 259 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 CSH1P0DML2 217 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 CSH2P0DML3 217 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 SLC25A3Q00325 362 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 STX3Q13277 289 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 LRRN4Q8WUT4 740 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 YIPF2Q9BWQ6 316 aa18.77■□□□□ 0.6
TNFRSF8-205ENST00000514649 SDR42E2A6NKP2 422 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 PIM1P11309 404 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 OSBPP22059 807 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 CDH8P55286 799 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 IRX4P78413 519 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 PDE1BQ01064 536 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 CDK18Q07002 472 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 TBCCQ15814 346 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 LRRC36Q1X8D7 754 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 SNRNP48Q6IEG0 339 aaKnown RBP18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 KYAT3Q6YP21 454 aaKnown RBP18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 PYDC1Q8WXC3 89 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 NDUFA13Q9P0J0 144 aa18.76■□□□□ 0.59
TNFRSF8-205ENST00000514649 PAK5Q9P286 719 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms