RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	PNLIPRP1	P54315	467 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	AP2B1	P63010	937 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	G3BP1	Q13283	466 aa	Known RBP eCLIP	3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TUBB3	Q13509	450 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ATP1A4	Q13733	1029 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TRIM60	Q495X7	471 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	FAAH2	Q6GMR7	532 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	LAYN	Q6UX15	382 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	RAB11FIP2	Q7L804	512 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	C2CD5	Q86YS7	1000 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TMTC1	Q8IUR5	882 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	FAM98A	Q8NCA5	519 aa	Known RBP	3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	OR6Y1	Q8NGX8	325 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	POC1B	Q8TC44	478 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ATRIP	Q8WXE1	791 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ASB12	Q8WXK4	309 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	NUDT22	Q9BRQ3	303 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	SLC26A6	Q9BXS9	759 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TRIM5	Q9C035	493 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	UBN1	Q9NPG3	1134 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	CTTNBP2NL	Q9P2B4	639 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	SCAF8	Q9UPN6	1271 aa	Known RBP	3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	RAD54B	Q9Y620	910 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	WNT6	Q9Y6F9	365 aa		3.92	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	HMX3	A6NHT5	357 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	FCHO1	O14526	889 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PCDH17	O14917	1159 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PIAS2	O75928	621 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	BAIAP3	O94812	1187 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	MBD4	O95243	580 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TTLL1	O95922	423 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	VIP	P01282	170 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TK1	P04183	234 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PECAM1	P16284	738 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PPIF	P30405	207 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	GCLC	P48506	637 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PXN	P49023	591 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	NDUFV1	P49821	464 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TOB1	P50616	345 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	DGKE	P52429	567 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ACTR2	P61160	394 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	KRT17	Q04695	432 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	MANEAL	Q5VSG8	457 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	SUMO4	Q6EEV6	95 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	NFRKB	Q6P4R8	1299 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	C1orf122	Q6ZSJ8	110 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TMPRSS9	Q7Z410	1059 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ZNF804A	Q7Z570	1209 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	RASGRP3	Q8IV61	690 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ESX1	Q8N693	406 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TSPYL6	Q8N831	410 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PCYOX1L	Q8NBM8	494 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PSD4	Q8NDX1	1056 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TOR1AIP2	Q8NFQ8	470 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	BPIFB1	Q8TDL5	484 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ABHD5	Q8WTS1	349 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PTDSS2	Q9BVG9	487 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	TLR10	Q9BXR5	811 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	SLC25A32	Q9H2D1	315 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	JMJD4	Q9H9V9	463 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	MLXIP	Q9HAP2	919 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	ALG13	Q9NP73	1137 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	EHD3	Q9NZN3	535 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	PI4KB	Q9UBF8	816 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	DNAJB11	Q9UBS4	358 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	FEM1B	Q9UK73	627 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	NFU1	Q9UMS0	254 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	HPSE	Q9Y251	543 aa		3.91	□□□□□ -1.78
CALCOCO2-223	ENST00000514267	EFCAB8	A8MWE9	144 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		B9A039	149 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267		F5H697	171 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CD3EAP	O15446	510 aa	Known RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	RASAL1	O95294	804 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ONECUT2	O95948	504 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	PRKCB	P05771	671 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	LDHC	P07864	332 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ANXA6	P08133	673 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KCNA3	P22001	575 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	KRT9	P35527	623 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	AARS	P49588	968 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	UBE3A	Q05086	875 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TRPC3	Q13507	836 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	L1TD1	Q5T7N2	865 aa	Known RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	CACHD1	Q5VU97	1274 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MZT2B	Q6NZ67	158 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TAF2	Q6P1X5	1199 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	ANKS1B	Q7Z6G8	1248 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TTC30A	Q86WT1	665 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SPART	Q8N0X7	666 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	HASPIN	Q8TF76	798 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	SNRNP27	Q8WVK2	155 aa	Known RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	WDR60	Q8WVS4	1066 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	HDAC2	Q92769	488 aa	Known RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	MAEL	Q96JY0	434 aa	Known RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TPSD1	Q9BZJ3	242 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TTYH3	Q9C0H2	523 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	TMX4	Q9H1E5	349 aa	Predicted RBP	3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	G6PC2	Q9NQR9	355 aa		3.9	□□□□□ -1.79
CALCOCO2-223	ENST00000514267	IFT80	Q9P2H3	777 aa	Predicted RBP	3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms