RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 SNIP1Q8TAD8 396 aaKnown RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 OVCA2Q8WZ82 227 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 RAD54LQ92698 747 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 PRCCQ92733 491 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 SIPA1Q96FS4 1042 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 ANKRD36BP1Q96IX9 119 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 DUSP9Q99956 384 aaKnown RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 MRPL45Q9BRJ2 306 aaKnown RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 SNX25Q9H3E2 840 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 DPEP3Q9H4B8 488 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 CLMPQ9H6B4 373 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 WDR35Q9P2L0 1181 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 CHORDC1Q9UHD1 332 aaPredicted RBP11.12□□□□□ -0.63
CLDND1-227ENST00000513452 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 EXOC7Q9UPT5 735 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 ANKRD6Q9Y2G4 727 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 NME7Q9Y5B8 376 aa11.12□□□□□ -0.63
CLDND1-227ENST00000513452 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 H0Y8X5 98 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 PCDHGA12O60330 932 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 SYNCRIPO60506 623 aaKnown RBP11.11□□□□□ -0.63
CLDND1-227ENST00000513452 PPP1R37O75864 691 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 LDHAP00338 332 aaKnown RBP11.11□□□□□ -0.63
CLDND1-227ENST00000513452 ACADMP11310 421 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 UBA7P41226 1012 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 IL12RB1P42701 662 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 TUBP50607 506 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 SLC5A3P53794 718 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 HTR3DQ70Z44 454 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 TMPRSS6Q8IU80 811 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 OR5B17Q8NGF7 314 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 OR6B3Q8NGW1 331 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 IGSF8Q969P0 613 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 CBWD1Q9BRT8 395 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 NUP58Q9BVL2 599 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 C6orf106Q9H6K1 298 aaPredicted RBP11.11□□□□□ -0.63
CLDND1-227ENST00000513452 TM9SF3Q9HD45 589 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 PLK2Q9NYY3 685 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 LIMCH1Q9UPQ0 1083 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 SPTA1P02549 2419 aa11.11□□□□□ -0.63
CLDND1-227ENST00000513452 ERVH48-1M5A8F1 160 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 CBX4O00257 560 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 SLC26A4O43511 780 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 GREM1O60565 184 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 TLR5O60602 858 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 IGLV3-19P01714 112 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 TNNC2P02585 160 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 CISD3P0C7P0 127 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 PTPN1P18031 435 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 GNL1P36915 607 aaPredicted RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 GRIA4P48058 902 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 TLE3Q04726 772 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 TARDBPQ13148 414 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 RILPL1Q5EBL4 403 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 L1TD1Q5T7N2 865 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 HES3Q5TGS1 186 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 SNX30Q5VWJ9 437 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 ARL6IP4Q66PJ3 421 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 MCTP1Q6DN14 999 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 LARP4BQ92615 738 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 AK8Q96MA6 479 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 ACCSQ96QU6 501 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 KCNK16Q96T55 309 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 ARID3AQ99856 593 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 B3GNT5Q9BYG0 378 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 PCIF1Q9H4Z3 704 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 MRPL44Q9H9J2 332 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 INTS13Q9NVM9 706 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 TBC1D7Q9P0N9 293 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 LSM7Q9UK45 103 aaKnown RBP11.1□□□□□ -0.63
CLDND1-227ENST00000513452 TMEM131Q92545 1883 aa11.1□□□□□ -0.63
CLDND1-227ENST00000513452 ENC1O14682 589 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 BRINP1O60477 761 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 RFPL3O75679 317 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 GCNT3O95395 438 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 GARTP22102 1010 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 PGFP49763 221 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 ZNF132P52740 706 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 COPAP53621 1224 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 CDH8P55286 799 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 GOLGA8FQ08AF8 430 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 GOLGA8DPQ0D2H9 430 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 DNAJC3Q13217 504 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 RTP5Q14D33 572 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 KCNT1Q5JUK3 1230 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 USP49Q70CQ1 688 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 ADAT2Q7Z6V5 191 aaKnown RBP11.09□□□□□ -0.63
CLDND1-227ENST00000513452 GATAD2AQ86YP4 633 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 SPACA3Q8IXA5 215 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 FAM181AQ8N9Y4 354 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 B3GALNT2Q8NCR0 500 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 TMEM176AQ96HP8 235 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 STRA6Q9BX79 667 aa11.09□□□□□ -0.63
CLDND1-227ENST00000513452 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms