RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 COG7P83436 770 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 NCAPHQ15003 741 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 MEA1Q16626 185 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 PKN3Q6P5Z2 889 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 Q6ZNB5 142 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 ALYREFQ86V81 257 aaKnown RBP18.59■□□□□ 0.57
DDR1-272ENST00000513243 C12orf40Q86WS4 652 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 CLEC4CQ8WTT0 213 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 IRGQQ8WZA9 623 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 EDEM1Q92611 657 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 LSM14BQ9BX40 385 aaKnown RBP18.59■□□□□ 0.57
DDR1-272ENST00000513243 SPHK2Q9NRA0 654 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 CYTH4Q9UIA0 394 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 LSM7Q9UK45 103 aaKnown RBP18.59■□□□□ 0.57
DDR1-272ENST00000513243 FHOD1Q9Y613 1164 aa18.59■□□□□ 0.57
DDR1-272ENST00000513243 RNF40O75150 1001 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 HMBSP08397 361 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 CLCN1P35523 988 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 GAD2Q05329 585 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 PTK2Q05397 1052 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 DRAP1Q14919 205 aaPredicted RBP18.58■□□□□ 0.56
DDR1-272ENST00000513243 FAM71AQ8IYT1 594 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 STK32AQ8WU08 396 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 NELL1Q92832 810 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 NAA15Q9BXJ9 866 aaKnown RBP18.58■□□□□ 0.56
DDR1-272ENST00000513243 SLC4A5Q9BY07 1137 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 MIS12Q9H081 205 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 HSD3B7Q9H2F3 369 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 ST7Q9NRC1 585 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 ABCC13Q9NSE7 274 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 STRIP2Q9ULQ0 834 aa18.58■□□□□ 0.56
DDR1-272ENST00000513243 SLC12A8A0AV02 714 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 HOXC11O43248 304 aaPredicted RBP18.57■□□□□ 0.56
DDR1-272ENST00000513243 FBXO21O94952 628 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 UCHL3P15374 230 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 ZNF18P17022 549 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 COPB1P53618 953 aaKnown RBP18.57■□□□□ 0.56
DDR1-272ENST00000513243 MESP2Q0VG99 397 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 RAPGEF1Q13905 1077 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 ANO4Q32M45 955 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 FBXO43Q4G163 708 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 ANO6Q4KMQ2 910 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 SLC47A2Q86VL8 602 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 SCUBE3Q8IX30 993 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 RNF139Q8WU17 664 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 PNKPQ96T60 521 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 OLA1Q9NTK5 396 aaKnown RBP18.57■□□□□ 0.56
DDR1-272ENST00000513243 LIMA1Q9UHB6 759 aaKnown RBP18.57■□□□□ 0.56
DDR1-272ENST00000513243 SFMBT1Q9UHJ3 866 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 MYOFQ9NZM1 2061 aa18.57■□□□□ 0.56
DDR1-272ENST00000513243 K7EQS6 105 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 PAPSS2O95340 614 aaPredicted RBP18.56■□□□□ 0.56
DDR1-272ENST00000513243 TPM2P07951 284 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 CORO1AP31146 461 aaKnown RBP18.56■□□□□ 0.56
DDR1-272ENST00000513243 HOXC13P31276 330 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 EIF2DP41214 584 aaKnown RBP18.56■□□□□ 0.56
DDR1-272ENST00000513243 ACADSBP45954 432 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 KLK7P49862 253 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 PPP2R5DQ14738 602 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 TMEM110Q86TL2 294 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 FMNL3Q8IVF7 1028 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 SFTPA1Q8IWL2 248 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 ETFBKMTQ8IXQ9 262 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 WDTC1Q8N5D0 677 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 AOPEPQ8N6M6 819 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 NAT16Q8N8M0 369 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 ZBTB44Q8NCP5 570 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 PLCB1Q9NQ66 1216 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 ZSCAN32Q9NX65 697 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 PCDHGC3Q9UN70 934 aa18.56■□□□□ 0.56
DDR1-272ENST00000513243 ANTXRLA6NF34 631 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 LRRC10BA6NIK2 292 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 CHURC1-FNTBB4DL54 471 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 K7ESF4 209 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 PAPSS1O43252 624 aaPredicted RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 ATG13O75143 517 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 LTFP02788 710 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 FYNP06241 537 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 PDCLQ13371 301 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 TRIP4Q15650 581 aaPredicted RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 KLHL40Q2TBA0 621 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 FKBP15Q5T1M5 1219 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 MSANTD2Q6P1R3 559 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 ZC3H14Q6PJT7 736 aaKnown RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 TPGS1Q6ZTW0 290 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 APTXQ7Z2E3 356 aaKnown RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 DENND1CQ8IV53 801 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 PASD1Q8IV76 773 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 PHTF2Q8N3S3 785 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 ANKRD20A12PQ8NF67 263 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 NKD2Q969F2 451 aaPredicted RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 BBS2Q9BXC9 721 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 FAM126AQ9BYI3 521 aaPredicted RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 STK33Q9BYT3 514 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 DCLK3Q9C098 648 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 NAT10Q9H0A0 1025 aaKnown RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 GANQ9H2C0 597 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 LHX5Q9H2C1 402 aa18.55■□□□□ 0.56
DDR1-272ENST00000513243 POLR3BQ9NW08 1133 aaPredicted RBP18.55■□□□□ 0.56
DDR1-272ENST00000513243 MARK1Q9P0L2 795 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms