RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 RECQL4O94761 1208 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 CENPAP49450 140 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 SCNN1GP51170 649 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ACAP1Q15027 740 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 SLC24A5Q71RS6 500 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 STK40Q8N2I9 435 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 RIBC1Q8N443 379 aaPredicted RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 CXorf38Q8TB03 319 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 VAT1Q99536 393 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 RUSC1Q9BVN2 902 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ING2Q9H160 280 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 RASSF4Q9H2L5 321 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 NEK6Q9HC98 313 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ZCCHC17Q9NP64 241 aaKnown RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 GPRC5CQ9NQ84 441 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.38□□□□□ -1.71
VCAN-209ENST00000513016 INTS7Q9NVH2 962 aaKnown RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 RBM22Q9NW64 420 aaKnown RBP eCLIP4.38□□□□□ -1.71
VCAN-209ENST00000513016 ADA2Q9NZK5 511 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 FAM198AQ9UFP1 575 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 SLC45A1Q9Y2W3 748 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 PTCH2Q9Y6C5 1203 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 CLUHO75153 1309 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 FGF10O15520 208 aaPredicted RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 HAUS5O94927 633 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 UBA1P22314 1058 aaKnown RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 PIK3CGP48736 1102 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 SCNN1BP51168 640 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 MYL6P60660 151 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 YWHAZP63104 245 aaKnown RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 CDC16Q13042 620 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 PTK7Q13308 1070 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 AASDHQ4L235 1098 aaPredicted RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 ATAD3BQ5T9A4 648 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ILDR2Q71H61 639 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ZNF720Q7Z2F6 126 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 CYP4Z1Q86W10 505 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 LEMD2Q8NC56 503 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 LPCAT1Q8NF37 534 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 PPTC7Q8NI37 304 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 UBE2E3Q969T4 207 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 TTPALQ9BTX7 342 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 MPP6Q9NZW5 540 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 KLHL3Q9UH77 587 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 MAPRE3Q9UPY8 281 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 SLC27A6Q9Y2P4 619 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.38□□□□□ -1.71
VCAN-209ENST00000513016 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 NCK2O43639 380 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 UQCRBP14927 111 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ELNP15502 786 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 PTPN2P17706 415 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 PRIM2P49643 509 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 TUBP50607 506 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ACTN3Q08043 901 aaPredicted RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 USP4Q13107 963 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 CLEC16AQ2KHT3 1053 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 C6orf10Q5SRN2 563 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 COLGALT2Q8IYK4 626 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 NUP93Q8N1F7 819 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 HDDC3Q8N4P3 179 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 NT5MQ9NPB1 228 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 ELOVL2Q9NXB9 296 aa4.38□□□□□ -1.71
VCAN-209ENST00000513016 TIMM13Q9Y5L4 95 aaPredicted RBP4.38□□□□□ -1.71
VCAN-209ENST00000513016 MGAT4DA6NG13 374 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TRPC5OSA6NMA1 111 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 LACTBL1A8MY62 500 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CATP04040 527 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 RBP1P09455 135 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TCF3P15923 654 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PTPN1P18031 435 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 KRT4P19013 534 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 NR1D1P20393 614 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TLX1P31314 330 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 NDST1P52848 882 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 HNRNPH2P55795 449 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 KCNK10P57789 538 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SESN3P58005 492 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ANTXR2P58335 489 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 STX3Q13277 289 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GRB10Q13322 594 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TUSC3Q13454 348 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TTC39BQ5VTQ0 682 aaPredicted RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 FBXW10Q5XX13 1052 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CHPFQ8IZ52 775 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CDK20Q8IZL9 346 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 OTULINQ96BN8 352 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ZBTB9Q96C00 473 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 SYBUQ9NX95 663 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ABI3Q9P2A4 366 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 DEC1Q9P2X7 70 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 PSME2Q9UL46 239 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 A0A0G2JND7 137 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 GTPBP10A4D1E9 387 aaKnown RBP4.37□□□□□ -1.71
VCAN-209ENST00000513016 SMIM22K7EJ46 135 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ADGRB2O60241 1585 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 CCNDBP1O95273 360 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 TRIM16O95361 564 aa4.37□□□□□ -1.71
VCAN-209ENST00000513016 ERBB2P04626 1255 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms