RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 SLITRK3O94933 977 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 RARAP10276 462 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 PYGMP11217 842 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 NR2C2P49116 596 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 OXCT1P55809 520 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 RPL10AP62906 217 aaKnown RBP12.83□□□□□ -0.35
COL11A1-210ENST00000512756 FUT11Q495W5 492 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 ZPBP2Q6X784 338 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 ZKSCAN4Q969J2 545 aaPredicted RBP12.83□□□□□ -0.35
COL11A1-210ENST00000512756 FBXO32Q969P5 355 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 KCNQ5Q9NR82 932 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 THAP1Q9NVV9 213 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 CTNNAL1Q9UBT7 734 aa12.83□□□□□ -0.35
COL11A1-210ENST00000512756 NFIBO00712 420 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 GLP2RO95838 553 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 DPEP1P16444 411 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ELK3P41970 407 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ERO1BQ86YB8 467 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CENPLQ8N0S6 344 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 FICDQ9BVA6 458 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 PCDHGC5Q9Y5F6 944 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 E9PBE3 544 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 STK25O00506 426 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 UBDO15205 165 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 KLHL41O60662 606 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ITGALP20701 1170 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 BLVRAP53004 296 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 LAMTOR4Q0VGL1 99 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CNTN1Q12860 1018 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 FBXO47Q5MNV8 452 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CCDC81Q6ZN84 652 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 GLT1D1Q96MS3 346 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CLPBQ9H078 707 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 MMADHCQ9H3L0 296 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ASB7Q9H672 318 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 TCF7L2Q9NQB0 619 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 NINJ2Q9NZG7 142 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 DIP2BQ9P265 1576 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CLPTM1O96005 669 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ASS1P00966 412 aaKnown RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 PAEPP09466 180 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 RAP1GAPP47736 663 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 GCLCP48506 637 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CDH17Q12864 832 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 NAB1Q13506 487 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 PGM5Q15124 567 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 TRIM16LQ309B1 348 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ATP6AP1LQ52LC2 224 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 IZUMO2Q6UXV1 221 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 BTBD10Q9BSF8 475 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 PRR23D1E9PI22 279 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 PRR23D2P0DMB1 279 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 SHMT1P34896 483 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 GTF2A2P52657 109 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ARHGAP15Q53QZ3 475 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 ACBD5Q5T8D3 534 aaPredicted RBP12.83□□□□□ -0.36
COL11A1-210ENST00000512756 IYDQ6PHW0 289 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 FAM83AQ86UY5 434 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
COL11A1-210ENST00000512756 CYTH3O43739 400 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 UPP2O95045 317 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 THP07101 528 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 MLNP12872 115 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ALOX15P16050 662 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 DNAJB2P25686 324 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 PRKCIP41743 596 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 PSMD7P51665 324 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 KPNA1P52294 538 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 TBL3Q12788 808 aaKnown RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 MTA1Q13330 715 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 BMPR2Q13873 1038 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 PPP4R4Q6NUP7 873 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ZBTB49Q6ZSB9 765 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 RNF180Q86T96 592 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ARHGEF19Q8IW93 802 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 VPS33AQ96AX1 596 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SATB2Q9UPW6 733 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ITSN1Q15811 1721 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 ZCCHC18P0CG32 403 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 PECAM1P16284 738 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 TNFRSF8P28908 595 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 NPY2RP49146 381 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 RAD23AP54725 363 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 NFE2Q16621 373 aaPredicted RBP12.82□□□□□ -0.36
COL11A1-210ENST00000512756 NFIL3Q16649 462 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 CYP51A1Q16850 503 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 TCP10LQ8TDR4 215 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 CYP4F12Q9HCS2 524 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SAR1AQ9NR31 198 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 TRHDEQ9UKU6 1024 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 AGLP35573 1532 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 A0A087X0B3 334 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 SAC3D1A6NKF1 404 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 TRIM13O60858 407 aa12.82□□□□□ -0.36
COL11A1-210ENST00000512756 GYS1P13807 737 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms