RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 HPDLQ96IR7 371 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 SPATA17Q96L03 361 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 NSUN5Q96P11 429 aaKnown RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 FNBP1Q96RU3 617 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 MMS19Q96T76 1030 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 P2RY13Q9BPV8 354 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 SYT15Q9BQS2 421 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 ZMYND15Q9H091 742 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 ZFP64Q9NPA5 681 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 HPS4Q9NQG7 708 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 DUS2Q9NX74 493 aaKnown RBP7.67□□□□□ -1.18
USP46-208ENST00000512656 CDH9Q9ULB4 789 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 MTMR6Q9Y217 621 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 CCL26Q9Y258 94 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 SDK1Q7Z5N4 2213 aa7.67□□□□□ -1.18
USP46-208ENST00000512656 TSC2P49815 1807 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 A0A087X0B3 334 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.66□□□□□ -1.18
USP46-208ENST00000512656 SPTLC2O15270 562 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 PPP6R2O75170 966 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 NFATC1O95644 943 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 CCDC192P0DO97 292 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 TCF3P15923 654 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 HDCP19113 662 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 TNNI1P19237 187 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 WARSP23381 471 aaKnown RBP7.66□□□□□ -1.18
USP46-208ENST00000512656 GRIK1P39086 918 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 PPP3CCP48454 512 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 GPR15P49685 360 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 GALK1P51570 392 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 ASIC1P78348 528 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 DMWDQ09019 674 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 HYAL2Q12891 473 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 SRSF5Q13243 272 aaKnown RBP7.66□□□□□ -1.18
USP46-208ENST00000512656 SDHAF4Q5VUM1 108 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 TRIM68Q6AZZ1 485 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 IL31Q6EBC2 164 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 FSTL4Q6MZW2 842 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 FAM171BQ6P995 826 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 DENND5BQ6ZUT9 1274 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 HS2ST1Q7LGA3 356 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 OSTM1Q86WC4 334 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 CBWD2Q8IUF1 395 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 WDR49Q8IV35 697 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 KIAA1958Q8N8K9 716 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 LINC00301Q8NCQ3 95 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 TTC16Q8NEE8 873 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 ZSWIM2Q8NEG5 633 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 CXorf38Q8TB03 319 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 SH3RF2Q8TEC5 729 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 CD101Q93033 1021 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 PKMYT1Q99640 499 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 FGFBP2Q9BYJ0 223 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 TRIM9Q9C026 710 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 SNX25Q9H3E2 840 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 AKTIPQ9H8T0 292 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 ECT2Q9H8V3 914 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 MAGEF1Q9HAY2 307 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 KBTBD4Q9NVX7 518 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 HSPBP1Q9NZL4 362 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 TRPM5Q9NZQ8 1165 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 CGNQ9P2M7 1197 aaKnown RBP7.66□□□□□ -1.18
USP46-208ENST00000512656 SIX4Q9UIU6 781 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 ARHGAP26Q9UNA1 814 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.66□□□□□ -1.18
USP46-208ENST00000512656 CHD6Q8TD26 2715 aa7.66□□□□□ -1.18
USP46-208ENST00000512656 SLC9A3R1O14745 358 aaPredicted RBP7.65□□□□□ -1.18
USP46-208ENST00000512656 CUTAO60888 179 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 TACC1O75410 805 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 TADA3O75528 432 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 RHOBTB1O94844 696 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 UBE4BO95155 1302 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 EPN2O95208 641 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 YEATS4O95619 227 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 APBB3O95704 486 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 EGFP01133 1207 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 PDGFRBP09619 1106 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 ZNF806P0C7X5 589 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 DLATP10515 647 aaKnown RBP7.65□□□□□ -1.18
USP46-208ENST00000512656 ARSAP15289 507 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 ANK1P16157 1881 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 BDNFP23560 247 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 GJA4P35212 333 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 GNL1P36915 607 aaPredicted RBP7.65□□□□□ -1.18
USP46-208ENST00000512656 TNNC1P63316 161 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 CYP27A1Q02318 531 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 TCHHQ07283 1943 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 TRPC3Q13507 836 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 LRP8Q14114 963 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 ELF2Q15723 593 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 ZNF77Q15935 545 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 SNRNP35Q16560 246 aaKnown RBP7.65□□□□□ -1.18
USP46-208ENST00000512656 AASDHQ4L235 1098 aaPredicted RBP7.65□□□□□ -1.18
USP46-208ENST00000512656 FAM26FQ5R3K3 315 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 LMBRD2Q68DH5 695 aaPredicted RBP7.65□□□□□ -1.18
USP46-208ENST00000512656 CNNM4Q6P4Q7 775 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 SYT13Q7L8C5 426 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 TRAPPC11Q7Z392 1133 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 LIMS2Q7Z4I7 341 aa7.65□□□□□ -1.18
USP46-208ENST00000512656 C11orf74Q86VG3 221 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms