RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 ACSS2Q9NR19 701 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 SLC35D1Q9NTN3 355 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 KCND3Q9UK17 655 aa6.6□□□□□ -1.35
CHD1-208ENST00000512392 E7EVH7 732 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 ZNF263O14978 683 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 POLR3GO15318 223 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 KLK10O43240 276 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 RNGTTO60942 597 aaKnown RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 ASGR1P07306 291 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 CPA1P15085 419 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 NPPBP16860 134 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 DNAJB1P25685 340 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 NFKBIAP25963 317 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 PITPNBP48739 271 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 ETV1P50549 477 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 ATXN3P54252 364 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 TRDNQ13061 729 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 TRA2AQ13595 282 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD1-208ENST00000512392 SPIDRQ14159 915 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 SLBPQ14493 270 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD1-208ENST00000512392 NEDD9Q14511 834 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 KHDC1Q4VXA5 237 aaKnown RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 SPDYCQ5MJ68 293 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 CYP4A22Q5TCH4 519 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 THEMIS2Q5TEJ8 643 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 SYT13Q7L8C5 426 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 SYCP3Q8IZU3 236 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 C3orf20Q8ND61 904 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 METTL21AQ8WXB1 218 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 MRPS27Q92552 414 aaKnown RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 RAB7BQ96AH8 199 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 ADAD1Q96M93 576 aaKnown RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 PHF7Q9BWX1 381 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 TEX12Q9BXU0 123 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 TEX13AQ9BXU3 409 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 MAGEB5Q9BZ81 275 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 POLR3BQ9NW08 1133 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 SIRT5Q9NXA8 310 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 HSPBP1Q9NZL4 362 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 SUCLA2Q9P2R7 463 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 IL19Q9UHD0 177 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 RPH3AQ9Y2J0 694 aaPredicted RBP6.59□□□□□ -1.35
CHD1-208ENST00000512392 DERAQ9Y315 318 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 B3GALT1Q9Y5Z6 326 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 CLCA3PQ9Y6N3 262 aa6.59□□□□□ -1.35
CHD1-208ENST00000512392 RNF103-CHMP3A0A140T963 221 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 HMX2A2RU54 273 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 LRRD1A4D1F6 860 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 RNF103O00237 685 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 MEIS1O00470 390 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 MAN2B1O00754 1011 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 TUBBP07437 444 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 TPBGLP0DKB5 382 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 IFNGR1P15260 489 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PTAFRP25105 342 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CD83Q01151 205 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PPP3CAQ08209 521 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SNX1Q13596 522 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SYCP1Q15431 976 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 TRADDQ15628 312 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 NFKBIBQ15653 356 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 FAM111BQ6SJ93 734 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CDH26Q8IXH8 852 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 FAM181AQ8N9Y4 354 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 ZNF507Q8TCN5 953 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SH3RF2Q8TEC5 729 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 DLG3Q92796 817 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SUCLG2Q96I99 432 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SAMD11Q96NU1 681 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 FUZQ9BT04 418 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 MAK16Q9BXY0 300 aaKnown RBP6.58□□□□□ -1.36
CHD1-208ENST00000512392 EIF2AQ9BY44 585 aaKnown RBP6.58□□□□□ -1.36
CHD1-208ENST00000512392 TRIM54Q9BYV2 358 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CHST8Q9H2A9 424 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CLSTN2Q9H4D0 955 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SLC35C2Q9NQQ7 365 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SERINC1Q9NRX5 453 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SEMA3GQ9NS98 782 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 TAS2R10Q9NYW0 307 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CTAGE15A4D2H0 777 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 GSC2O15499 205 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PTBP3O95758 552 aaKnown RBP6.58□□□□□ -1.36
CHD1-208ENST00000512392 CTAGE8P0CG41 777 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 SELLP14151 372 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 KCNA5P22460 613 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PSMA4P25789 261 aaKnown RBP6.58□□□□□ -1.36
CHD1-208ENST00000512392 ZNF81P51508 661 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 RARSP54136 660 aaKnown RBP6.58□□□□□ -1.36
CHD1-208ENST00000512392 CASP9P55211 416 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 ACY1Q03154 408 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PRKCZQ05513 592 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PPATQ06203 517 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 MAN2A1Q16706 1144 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 HSP90AA5PQ58FG0 334 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 PLEKHS1Q5SXH7 462 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CES4AQ5XG92 561 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 AP1ARQ63HQ0 302 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 RNF43Q68DV7 783 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 KCNV1Q6PIU1 500 aa6.58□□□□□ -1.36
CHD1-208ENST00000512392 CLEC2AQ6UVW9 174 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms