RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 GAD2Q05329 585 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 PPP2R5DQ14738 602 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 LPAL2Q16609 132 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 C2orf27AQ580R0 203 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 BTBD8Q5XKL5 378 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 KLHDC10Q6PID8 442 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 Q6ZNB5 142 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 RBM43Q6ZSC3 357 aaKnown RBP17.29■□□□□ 0.36
DDX41-213ENST00000512027 C11orf57Q6ZUT1 292 aaPredicted RBP17.29■□□□□ 0.36
DDX41-213ENST00000512027 SLC35F5Q8WV83 523 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 KCTD13Q8WZ19 329 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 BHMTQ93088 406 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 OTUB2Q96DC9 234 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 HHIPQ96QV1 700 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 TUBGCP2Q9BSJ2 902 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 APEX2Q9UBZ4 518 aa17.29■□□□□ 0.36
DDX41-213ENST00000512027 LSM7Q9UK45 103 aaKnown RBP17.29■□□□□ 0.36
DDX41-213ENST00000512027 SLC12A8A0AV02 714 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 KCNJ18B7U540 433 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 NEDD8-MDP1E9PL57 170 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 GOLGA6L22H0YM25 854 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 PES1O00541 588 aaKnown RBP17.28■□□□□ 0.36
DDX41-213ENST00000512027 KAT7O95251 611 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 MFAP3P55082 362 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 FBXO43Q4G163 708 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 VWA3BQ502W6 1294 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 EMC10Q5UCC4 262 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 TADA2BQ86TJ2 420 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 FAM114A1Q8IWE2 563 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 ETFBKMTQ8IXQ9 262 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 ARHGAP18Q8N392 663 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 PHTF2Q8N3S3 785 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 ZNF276Q8N554 614 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 DCLK2Q8N568 766 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 EXOC4Q96A65 974 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 PNKPQ96T60 521 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 MIS12Q9H081 205 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 NDST4Q9H3R1 872 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 ARHGEF4Q9NR80 690 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 TAB2Q9NYJ8 693 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 PLK2Q9NYY3 685 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 MARCH2Q9P0N8 246 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 SFMBT1Q9UHJ3 866 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 CYTH4Q9UIA0 394 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 NFE2L3Q9Y4A8 694 aa17.28■□□□□ 0.36
DDX41-213ENST00000512027 PTPRZ1P23471 2315 aaPredicted RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 GTPBP10A4D1E9 387 aaKnown RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 HOXC11O43248 304 aaPredicted RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 MSI1O43347 362 aaKnown RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 THAP12O43422 761 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 TULP3O75386 442 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 GNA15P30679 374 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 CORO1AP31146 461 aaKnown RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 NRLP54845 237 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 STILQ15468 1287 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 BSPRYQ5W0U4 402 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 DPY19L2P1Q6NXN4 242 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 CCDC33Q8N5R6 958 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 USP33Q8TEY7 942 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 CDK5RAP1Q96SZ6 601 aaKnown RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 BBS2Q9BXC9 721 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 FAM126AQ9BYI3 521 aaPredicted RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 SEMA4AQ9H3S1 761 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 ST7Q9NRC1 585 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 SMG5Q9UPR3 1016 aaKnown RBP17.27■□□□□ 0.36
DDX41-213ENST00000512027 SLC8A2Q9UPR5 921 aa17.27■□□□□ 0.36
DDX41-213ENST00000512027 DMXL1Q9Y485 3027 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 SPTBN4Q9H254 2564 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 HRO43593 1189 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 ATG13O75143 517 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 APODP05090 189 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 CHRM1P11229 460 aaPredicted RBP17.26■□□□□ 0.35
DDX41-213ENST00000512027 TIE1P35590 1138 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 EIF2DP41214 584 aaKnown RBP17.26■□□□□ 0.35
DDX41-213ENST00000512027 GPD2P43304 727 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 KCNMA1Q12791 1236 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 DMC1Q14565 340 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 TCP11X2Q5H9J9 407 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 PRR23BQ6ZRT6 265 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 ENOSF1Q7L5Y1 443 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 LONP2Q86WA8 852 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 DENND1CQ8IV53 801 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 FMNL3Q8IVF7 1028 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 ZNF606Q8WXB4 792 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 SHC3Q92529 594 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 HINFPQ9BQA5 517 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 EPC1Q9H2F5 836 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 CNGB3Q9NQW8 809 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 TJP2Q9UDY2 1190 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 DNAJC12Q9UKB3 198 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 AGO1Q9UL18 857 aaKnown RBP17.26■□□□□ 0.35
DDX41-213ENST00000512027 STRIP2Q9ULQ0 834 aa17.26■□□□□ 0.35
DDX41-213ENST00000512027 MYO18AQ92614 2054 aaKnown RBP17.25■□□□□ 0.35
DDX41-213ENST00000512027 FAM170AA1A519 330 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 TYRP14679 529 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 COG7P83436 770 aa17.25■□□□□ 0.35
DDX41-213ENST00000512027 TOGARAM2Q6ZUX3 1019 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms