RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 COG7P83436 770 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 GAD2Q05329 585 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 GOLGA8FQ08AF8 430 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 GOLGA8DPQ0D2H9 430 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 EFEMP1Q12805 493 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 MIB1Q86YT6 1006 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 ETFBKMTQ8IXQ9 262 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 SIX6OS1Q8N1H7 587 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 PHTF2Q8N3S3 785 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 SHC3Q92529 594 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 HSFY1Q96LI6 401 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 CNGB3Q9NQW8 809 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 POLR3BQ9NW08 1133 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 RASAL2Q9UJF2 1139 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 LSM7Q9UK45 103 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 AJAP1Q9UKB5 411 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 GVINP1Q7Z2Y8 2422 aa12.18□□□□□ -0.46
SH3RF1-205ENST00000511421 A0A0A0MRY4 1105 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 KCNJ18B7U540 433 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 ATG13O75143 517 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 LCP1P13796 627 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 KCNMA1Q12791 1236 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 KCNJ12Q14500 433 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 MEA1Q16626 185 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 ARHGAP44Q17R89 818 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 TCP11X2Q5H9J9 407 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 BSPRYQ5W0U4 402 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 BTBD8Q5XKL5 378 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 SMYD5Q6GMV2 418 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 SFTPA1Q8IWL2 248 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 USP33Q8TEY7 942 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 ZNF606Q8WXB4 792 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 PNKPQ96T60 521 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 MARK1Q9P0L2 795 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 MARCH2Q9P0N8 246 aa12.17□□□□□ -0.46
SH3RF1-205ENST00000511421 PIK3R2O00459 728 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 KAT7O95251 611 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 MBD3O95983 291 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 FNTBP49356 437 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 DENND1BQ6P3S1 775 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 C11orf57Q6ZUT1 292 aaPredicted RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 NAT16Q8N8M0 369 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 RPLP0P6Q8NHW5 317 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 IRGQQ8WZA9 623 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 EDEM1Q92611 657 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 EPC1Q9H2F5 836 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 DNAJC12Q9UKB3 198 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 SLC12A8A0AV02 714 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 THAP12O43422 761 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 TULP3O75386 442 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 HMBSP08397 361 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 GNA15P30679 374 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 GRIA2P42262 883 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 TRIP4Q15650 581 aaPredicted RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 ANO4Q32M45 955 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 CDKAL1Q5VV42 579 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 SYT13Q7L8C5 426 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 LONP2Q86WA8 852 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 CCDC26Q8TAB7 109 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 CLEC4CQ8WTT0 213 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 STK32AQ8WU08 396 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 SLC4A5Q9BY07 1137 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 DCLK3Q9C098 648 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 ARHGEF4Q9NR80 690 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 ABCC13Q9NSE7 274 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 OLA1Q9NTK5 396 aaKnown RBP12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 ANO10Q9NW15 660 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 SLC8A2Q9UPR5 921 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
SH3RF1-205ENST00000511421 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 TRIM24O15164 1050 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 MED7O43513 233 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 HRO43593 1189 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 CACNG3O60359 315 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 FBXO21O94952 628 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 APODP05090 189 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 CORO1AP31146 461 aaKnown RBP12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 USP8P40818 1118 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 SEC13P55735 322 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 KDSRQ06136 332 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 HEATR6Q6AI08 1181 aaKnown RBP12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 MSANTD2Q6P1R3 559 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 SASS6Q6UVJ0 657 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 TPGS1Q6ZTW0 290 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 WDR5BQ86VZ2 330 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 FMNL3Q8IVF7 1028 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 RNF139Q8WU17 664 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 ACDQ96AP0 544 aa12.15□□□□□ -0.46
SH3RF1-205ENST00000511421 BBS2Q9BXC9 721 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms