RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 CCNI2Q6ZMN8 369 aaPredicted RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 DENND5BQ6ZUT9 1274 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 BBS12Q6ZW61 710 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 BZW1Q7L1Q6 419 aaKnown RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 UBE2Q1Q7Z7E8 422 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 TADA2BQ86TJ2 420 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 MON1AQ86VX9 555 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 C7orf61Q8IZ16 206 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 CCDC89Q8N998 374 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 BBOF1Q8ND07 529 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 PHOSPHO2Q8TCD6 241 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 RAPGEF5Q92565 580 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 BADQ92934 168 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 SLCO2A1Q92959 643 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 RNF34Q969K3 372 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 PGAP3Q96FM1 320 aaPredicted RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 SPATA17Q96L03 361 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 PGLYRP2Q96PD5 576 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 CDK5RAP1Q96SZ6 601 aaKnown RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 SEPT5Q99719 369 aaPredicted RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 FERMT1Q9BQL6 677 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 C11orf84Q9BUA3 381 aaPredicted RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 DCLK3Q9C098 648 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 EPC1Q9H2F5 836 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 DHX35Q9H5Z1 703 aaKnown RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 OLA1Q9NTK5 396 aaKnown RBP11.11□□□□□ -0.63
DHFR-205ENST00000511032 DDIT4Q9NX09 232 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 SCML2Q9UQR0 700 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 RWDD3Q9Y3V2 267 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 CDY1Q9Y6F8 540 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 VWA8A3KMH1 1905 aa11.11□□□□□ -0.63
DHFR-205ENST00000511032 APOC4-APOC2K7ER74 178 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 APOL1O14791 398 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 CST8O60676 142 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 GJB5O95377 273 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 APOC2P02655 101 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 HAPLN1P10915 354 aaPredicted RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 KRT10P13645 584 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 TCF4P15884 667 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 TGM2P21980 687 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 ITGB8P26012 769 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 YWHAQP27348 245 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 TNNT3P45378 269 aaPredicted RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 DRG2P55039 364 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 DSG1Q02413 1049 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 NME3Q13232 169 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 DPYSL2Q16555 572 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 TAZQ16635 292 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 ATP13A4Q4VNC1 1196 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 CEP128Q6ZU80 1094 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 PDZD4Q76G19 769 aaPredicted RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 GPRIN1Q7Z2K8 1008 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 HDXQ7Z353 690 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 DDX53Q86TM3 631 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 JAMLQ86YT9 394 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 ARFGAP1Q8N6T3 406 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 PDZD8Q8NEN9 1154 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 C1orf54Q8WWF1 131 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 IFT81Q8WYA0 676 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 P3H4Q92791 437 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 NT5C3BQ969T7 300 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 NTAN1Q96AB6 310 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 ERP44Q9BS26 406 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 RHOBTB2Q9BYZ6 727 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 GDF3Q9NR23 364 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 TLR8Q9NR97 1041 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 MRPL17Q9NRX2 175 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 CHST7Q9NS84 486 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 HCSTQ9UBK5 93 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 MTRF1LQ9UGC7 380 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 AFF4Q9UHB7 1163 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 DMGDHQ9UI17 866 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 ZNF148Q9UQR1 794 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
DHFR-205ENST00000511032 SLC4A7Q9Y6M7 1214 aa11.1□□□□□ -0.63
DHFR-205ENST00000511032 MYO16Q9Y6X6 1858 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 SYNJ2BP-COX16A0A087WUM0 186 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 DAPK3O43293 454 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 TBC1D4O60343 1298 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 SLC2A3P11169 496 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 OR1D2P34982 312 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 ACTN2P35609 894 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 ALDH1A3P47895 512 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 DYNLT1P63172 113 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 ROR1Q01973 937 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 CAV1Q03135 178 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 NNTQ13423 1086 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 SNX1Q13596 522 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 DPYSL3Q14195 570 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 LLGL1Q15334 1064 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 SIX1Q15475 284 aaPredicted RBP11.09□□□□□ -0.63
DHFR-205ENST00000511032 TAF12Q16514 161 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 PPP6R3Q5H9R7 873 aaPredicted RBP11.09□□□□□ -0.63
DHFR-205ENST00000511032 BRMS1LQ5PSV4 323 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 SH3PXD2AQ5TCZ1 1133 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 TXNRD3NBQ6F5E7 133 aa11.09□□□□□ -0.63
DHFR-205ENST00000511032 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms