RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MDM1Q8TC05 714 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 RSAD2Q8WXG1 361 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 KCTD13Q8WZ19 329 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 P3H4Q92791 437 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 ARHGEF2Q92974 986 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 NT5C3BQ969T7 300 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 SENP8Q96LD8 212 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 C9orf72Q96LT7 481 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 ZNF317Q96PQ6 595 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 QKIQ96PU8 341 aaKnown RBP eCLIP4.96□□□□□ -1.624e-24■■■■■ 117.3
PDLIM5-214ENST00000510099 SLC2A13Q96QE2 648 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 CCT8L2Q96SF2 557 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 KCTD15Q96SI1 283 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 ZIC5Q96T25 663 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 SYT15Q9BQS2 421 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 DHRS4Q9BTZ2 278 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 DUSP16Q9BY84 665 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 FAM107BQ9H098 131 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 RABEP2Q9H5N1 569 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 NRDE2Q9H7Z3 1164 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 C10orf88Q9H8K7 445 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 UBN1Q9NPG3 1134 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 CRTAC1Q9NQ79 661 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 XPNPEP3Q9NQH7 507 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 KRT82Q9NSB4 513 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 MTMR10Q9NXD2 777 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 PAK5Q9P286 719 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 RCOR3Q9P2K3 495 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 CTNNAL1Q9UBT7 734 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 FETUBQ9UGM5 382 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 RSPH14Q9UHP6 348 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 GGA2Q9UJY4 613 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 ZMYND8Q9ULU4 1186 aaPredicted RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 GABRQQ9UN88 632 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 AP4E1Q9UPM8 1137 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 RRP15Q9Y3B9 282 aaKnown RBP4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 PTCH2Q9Y6C5 1203 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 USP3Q9Y6I4 520 aa4.96□□□□□ -1.62
PDLIM5-214ENST00000510099 SF3B1O75533 1304 aaKnown RBP eCLIP4.96□□□□□ -1.623e-6■■■■■ 150.5
PDLIM5-214ENST00000510099 CASP8AP2Q9UKL3 1982 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 EXOC1LA0A1B0GW35 172 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TCRBV7S3A2A0A539 114 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TMEM120BA0PK00 339 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GRXCR2A6NFK2 248 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ARL5CA6NH57 179 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 C9IYK1 514 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 RNF223E7ERA6 249 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 H7C0C1 242 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GPR182O15218 404 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ST8SIA5O15466 376 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MGEA5O60502 916 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ZNF623O75123 536 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 BANF1O75531 89 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TOMM70O94826 608 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ZBED1O96006 694 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 THP07101 528 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 FAM200BP0CF97 657 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GHRP10912 638 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 LCP1P13796 627 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ZFXP17010 805 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PAX3P23760 479 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ACAT1P24752 427 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PCSK1P29120 753 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CD52P31358 61 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 STIP1P31948 543 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 L1CAMP32004 1257 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 RPL9P32969 192 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MATKP42679 507 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ATP5OP48047 213 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 LHX1P48742 406 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 NR2C2P49116 596 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SULT1E1P49888 294 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SCNN1GP51170 649 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 ATXN1P54253 815 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 BCAR1P56945 870 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SLC8A3P57103 927 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GPX6P59796 221 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MRPS5P82675 430 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CAP1Q01518 475 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GAD2Q05329 585 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CACNB2Q08289 660 aaPredicted RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SCAPQ12770 1279 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 GRIK3Q13003 919 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PDIA2Q13087 525 aaKnown RBP4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 NR1H3Q13133 447 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 PTK7Q13308 1070 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 XRCC4Q13426 336 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 LPIN1Q14693 890 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 TMED2Q15363 201 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SLC25A52Q3SY17 297 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MSS51Q4VC12 460 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 CCDC38Q502W7 563 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SLC45A4Q5BKX6 768 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 MDH1BQ5I0G3 518 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 RAB41Q5JT25 222 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 EFHC1Q5JVL4 640 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 FAM26DQ5JW98 314 aa4.95□□□□□ -1.62
PDLIM5-214ENST00000510099 SWT1Q5T5J6 900 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms