RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 DGKGP49619 791 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 BCAT1P54687 386 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 RACK1P63244 317 aaKnown RBP11.48□□□□□ -0.57
SNF8-207ENST00000509995 ASIC1P78348 528 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 FOXK1P85037 733 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 ENPP2Q13822 863 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 SGO2Q562F6 1265 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 IGF2-ASQ6U949 168 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 TMEM161BQ8NDZ6 487 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 TNFRSF25Q93038 417 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 JAKMIP1Q96N16 626 aaKnown RBP11.48□□□□□ -0.57
SNF8-207ENST00000509995 NTPCRQ9BSD7 190 aaKnown RBP11.48□□□□□ -0.57
SNF8-207ENST00000509995 BBS2Q9BXC9 721 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 TRIM9Q9C026 710 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 EPN3Q9H201 632 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 TMEM60Q9H2L4 133 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 EHD2Q9NZN4 543 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 PLEKHB1Q9UF11 243 aaPredicted RBP11.48□□□□□ -0.57
SNF8-207ENST00000509995 L1RE1Q9UN81 338 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 C2CD2Q9Y426 696 aa11.48□□□□□ -0.57
SNF8-207ENST00000509995 NPC1O15118 1278 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 PPFIA2O75334 1257 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 FSBPO95073 299 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 MAPTP10636 758 aaKnown RBP11.47□□□□□ -0.57
SNF8-207ENST00000509995 XBP1P17861 261 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 ARRB1P49407 418 aaPredicted RBP11.47□□□□□ -0.57
SNF8-207ENST00000509995 FOSBP53539 338 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 INHBCP55103 352 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 ECM1Q16610 540 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 PROX2Q3B8N5 592 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 ZSCAN23Q3MJ62 389 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 CDCP2Q5VXM1 449 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 HAUS3Q68CZ6 603 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 VSTM1Q6UX27 236 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 BICD1Q96G01 975 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 ZNF560Q96MR9 790 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 DEPDC7Q96QD5 511 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 CCNL2Q96S94 520 aaPredicted RBP11.47□□□□□ -0.57
SNF8-207ENST00000509995 DPP3Q9NY33 737 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 MARK1Q9P0L2 795 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 KIF26BQ2KJY2 2108 aa11.47□□□□□ -0.57
SNF8-207ENST00000509995 PTPRJQ12913 1337 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 COCHO43405 550 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 HCRTO43612 131 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 CSO75390 466 aaKnown RBP11.46□□□□□ -0.57
SNF8-207ENST00000509995 CISD3P0C7P0 127 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 RPS6KB1P23443 525 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 ANXA13P27216 316 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.57
SNF8-207ENST00000509995 TAF10Q12962 218 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 CLN3Q13286 438 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 IGFBP7Q16270 282 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 CPLX2Q6PUV4 134 aaKnown RBP11.46□□□□□ -0.57
SNF8-207ENST00000509995 C4orf50Q6ZRC1 276 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 OSTM1Q86WC4 334 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 TMEM86AQ8N2M4 240 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 WBP2Q969T9 261 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 SKA1Q96BD8 255 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 SLC6A18Q96N87 628 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 SLITRK1Q96PX8 696 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 BTBD1Q9H0C5 482 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 LHX5Q9H2C1 402 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 GDF3Q9NR23 364 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.57
SNF8-207ENST00000509995 THAP10Q9P2Z0 257 aaPredicted RBP11.46□□□□□ -0.57
SNF8-207ENST00000509995 CPSF3Q9UKF6 684 aaKnown RBP11.46□□□□□ -0.57
SNF8-207ENST00000509995 COL27A1Q8IZC6 1860 aaPredicted RBP11.46□□□□□ -0.58
SNF8-207ENST00000509995 SETD2Q9BYW2 2564 aaPredicted RBP11.46□□□□□ -0.58
SNF8-207ENST00000509995 SFI1A8K8P3 1242 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 HNRNPDLO14979 420 aaKnown RBP11.45□□□□□ -0.58
SNF8-207ENST00000509995 EFSO43281 561 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 WNT1P04628 370 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 ACO1P21399 889 aaKnown RBP11.45□□□□□ -0.58
SNF8-207ENST00000509995 PCSK1P29120 753 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 CDC25AP30304 524 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 KRT2P35908 639 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 LIG4P49917 911 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 CDH8P55286 799 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 TPGS1Q6ZTW0 290 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 KANSL1Q7Z3B3 1105 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 ADGRF2Q8IZF7 708 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 MYLPFQ96A32 169 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 ASB7Q9H672 318 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 MAGEC2Q9UBF1 373 aaPredicted RBP11.45□□□□□ -0.58
SNF8-207ENST00000509995 ATXN7L1Q9ULK2 861 aaPredicted RBP11.45□□□□□ -0.58
SNF8-207ENST00000509995 SATB2Q9UPW6 733 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 KIAA1024Q9UPX6 916 aa11.45□□□□□ -0.58
SNF8-207ENST00000509995 LRRK1Q38SD2 2015 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 F8P00451 2351 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 HUS1O60921 280 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 IGHV4-34P06331 123 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 IRF1P10914 325 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 BDNFP23560 247 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 PRKCHP24723 683 aa11.44□□□□□ -0.58
SNF8-207ENST00000509995 RBMS1P29558 406 aaKnown RBP11.44□□□□□ -0.58
SNF8-207ENST00000509995 CCT6AP40227 531 aaKnown RBP11.44□□□□□ -0.58
SNF8-207ENST00000509995 PNPLA4P41247 253 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms