RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 C3orf33Q6P1S2 294 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 CLEC4GQ6UXB4 293 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 ZBTB49Q6ZSB9 765 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 NUP54Q7Z3B4 507 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 RD3Q7Z3Z2 195 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 TMEM126BQ8IUX1 230 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 ERI1Q8IV48 349 aaKnown RBP3.68□□□□□ -1.82
USP53-205ENST00000509769 ARID3BQ8IVW6 561 aaPredicted RBP3.68□□□□□ -1.82
USP53-205ENST00000509769 COLGALT2Q8IYK4 626 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 GRAMD1CQ8IYS0 662 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 EID3Q8N140 333 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 ANKRD53Q8N9V6 530 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 KAT2AQ92830 837 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 TMEM237Q96Q45 408 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 FAM129BQ96TA1 746 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 NAT9Q9BTE0 207 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 RIOK2Q9BVS4 552 aaKnown RBP3.68□□□□□ -1.82
USP53-205ENST00000509769 SLC4A5Q9BY07 1137 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 FOXP1Q9H334 677 aaPredicted RBP3.68□□□□□ -1.82
USP53-205ENST00000509769 PNPLA8Q9NP80 782 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 PAK6Q9NQU5 681 aaPredicted RBP3.68□□□□□ -1.82
USP53-205ENST00000509769 UFSP2Q9NUQ7 469 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.68□□□□□ -1.82
USP53-205ENST00000509769 FARSAQ9Y285 508 aaKnown RBP3.68□□□□□ -1.82
USP53-205ENST00000509769 MFHAS1Q9Y4C4 1052 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 PCDHGB3Q9Y5G1 929 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 SLC4A4Q9Y6R1 1079 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 DGKBQ9Y6T7 804 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 CARMIL3Q8ND23 1372 aa3.68□□□□□ -1.82
USP53-205ENST00000509769 A0A1W2PQJ5 194 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TTC34A8MYJ7 566 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PI4K2BG5E9Z4 385 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 H7C1Q1 480 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PRMT5O14744 637 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 RGL2O15211 777 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TGOLN2O43493 480 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MAGEC1O60732 1142 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 KHDRBS3O75525 346 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 KRT33AO76009 404 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 SAGP10523 405 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 EPCAMP16422 314 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ITGALP20701 1170 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CCNE1P24864 410 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CCND2P30279 289 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CIITAP33076 1130 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ETV6P41212 452 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MAPK9P45984 424 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CAPZA2P47755 286 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CTBP2P56545 445 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PLOD1Q02809 727 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 KRT33BQ14525 404 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 STXBP2Q15833 593 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 SYT16Q17RD7 645 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 FAM98BQ52LJ0 330 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 LBHQ53QV2 105 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 TNNI3KQ59H18 835 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 LCN1P1Q5VSP4 162 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TTC39BQ5VTQ0 682 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 ZNF57Q68EA5 555 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 KBTBD2Q8IY47 623 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TIGD4Q8IY51 512 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 NLGN2Q8NFZ4 835 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PI4K2BQ8TCG2 481 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 RAB2BQ8WUD1 216 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ASB15Q8WXK1 588 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 JDP2Q8WYK2 163 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 NXNL1Q96CM4 212 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 GPRASP2Q96D09 838 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MED30Q96HR3 178 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ZFP42Q96MM3 310 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 NT5C1BQ96P26 610 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 YME1L1Q96TA2 773 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 CDC6Q99741 560 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 LRMDAQ9H2I8 198 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ARMC7Q9H6L4 198 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 WDR26Q9H7D7 661 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TMEM165Q9HC07 324 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TMBIM4Q9HC24 238 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TCF7L2Q9NQB0 619 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 NFKBIL1Q9UBC1 381 aaPredicted RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 PTBP2Q9UKA9 531 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 MAFFQ9ULX9 164 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 EDARQ9UNE0 448 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 ABCC6O95255 1503 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 GNAT3A8MTJ3 354 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TSPAN4O14817 238 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 KPNA5O15131 536 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 MPZL2O60487 215 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 DNAJA2O60884 412 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 GLRA3O75311 464 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TRMUO75648 421 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 PRKD3O94806 890 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PLEKHA8P1O95397 391 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PSMG1O95456 288 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 WDPCPO95876 746 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 LDHAP00338 332 aaKnown RBP3.67□□□□□ -1.82
USP53-205ENST00000509769 SERPINA1P01009 418 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 IFNA17P01571 189 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 PFKFB1P16118 471 aa3.67□□□□□ -1.82
USP53-205ENST00000509769 TATP17735 454 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms