RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TRIM42Q8IWZ5 723 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 BEST2Q8NFU1 509 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 KANSL3Q9P2N6 904 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 FAM155BO75949 473 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 KRT38O76015 456 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 IL1BP01584 269 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 APOEP02649 317 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 ADCYAP1R1P41586 468 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 PTPN9P43378 593 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 FAM182AQ5T1J6 154 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 LRRC52Q8N7C0 313 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 FAM13CQ8NE31 585 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 B3GNT5Q9BYG0 378 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 DHX35Q9H5Z1 703 aaKnown RBP18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 SNTG2Q9NY99 539 aa18.6■□□□□ 0.57
CCHCR1-228ENST00000509552 RBM47A0AV96 593 aaKnown RBP18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 SLC15A5A6NIM6 579 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 A8MXQ7 604 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 KLF11O14901 512 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 GCATO75600 419 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 C1QAP02745 245 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 ADORA2AP29274 412 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 EPHB2P29323 1055 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 NR2C2P49116 596 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 DPYSL2Q16555 572 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 CTC1Q2NKJ3 1217 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 C7orf31Q8N865 590 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 GPRC5AQ8NFJ5 357 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 GTF3C2Q8WUA4 911 aaPredicted RBP18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 MTBPQ96DY7 904 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 TMEM120AQ9BXJ8 343 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 CNTN3Q9P232 1028 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 MAD1L1Q9Y6D9 718 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 PLXNA1Q9UIW2 1896 aa18.59■□□□□ 0.57
CCHCR1-228ENST00000509552 CXorf49A8MYA2 514 aaPredicted RBP18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 PPEF2O14830 753 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 CYP2C8P10632 490 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 L1CAMP32004 1257 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 CLNS1AP54105 237 aaKnown RBP18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 CDK16Q00536 496 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 WASHC2DQ5SRD0 308 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 ANKRD20A3Q5VUR7 823 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 ARHGAP17Q68EM7 881 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 SLC27A1Q6PCB7 646 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 SNX27Q96L92 541 aa18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 RPL26L1Q9UNX3 145 aaKnown RBP18.58■□□□□ 0.57
CCHCR1-228ENST00000509552 I3L4J1 428 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 CCDC22O60826 627 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 DNAJC6O75061 913 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 TPSB2P20231 275 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 SNAPC2Q13487 334 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 TPSAB1Q15661 275 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 KIZQ2M2Z5 673 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 MARCH8Q5T0T0 291 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 GSDMBQ8TAX9 411 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 ZMAT2Q96NC0 199 aaKnown RBP18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 TLE6Q9H808 572 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 RNPEPL1Q9HAU8 725 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 TUBGCP4Q9UGJ1 667 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 AP4E1Q9UPM8 1137 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 GINS2Q9Y248 185 aa18.58■□□□□ 0.56
CCHCR1-228ENST00000509552 GBE1Q04446 702 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 BST2Q10589 180 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 ATG16L1Q676U5 607 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 UNC5AQ6ZN44 842 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 SLC26A9Q7LBE3 791 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 CATSPER4Q7RTX7 472 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 FBXO41Q8TF61 875 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 LRRN4Q8WUT4 740 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 EBNA1BP2Q99848 306 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 XAB2Q9HCS7 855 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 PLLPQ9Y342 182 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 GABBR2O75899 941 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 METTL18O95568 372 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 DLDP09622 509 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 SERPINB3P29508 390 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 BCAT1P54687 386 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 SARNPP82979 210 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 HEATR6Q6AI08 1181 aaKnown RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 CENPIQ92674 756 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 NSL1Q96IY1 281 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 GCOM2Q9BZD3 368 aaPredicted RBP18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 DNAI2Q9GZS0 605 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 CXCL16Q9H2A7 254 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 KCNK13Q9HB14 408 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 NME7Q9Y5B8 376 aa18.57■□□□□ 0.56
CCHCR1-228ENST00000509552 TFE3P19532 575 aaPredicted RBP18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 CALB2P22676 271 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SCNN1AP37088 669 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 MAGEA3P43357 314 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 CCNG1P51959 295 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 ZBTB6Q15916 424 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 KCNT2Q6UVM3 1135 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 CDHR3Q6ZTQ4 885 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 ARCQ7LC44 396 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 ANKRD52Q8NB46 1076 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SKA1Q96BD8 255 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 SIGLEC10Q96LC7 697 aa18.56■□□□□ 0.56
CCHCR1-228ENST00000509552 QKIQ96PU8 341 aaKnown RBP eCLIP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms