RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 FAM183BPQ6ZVS7 135 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 ZBED8Q8IZ13 594 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 SLC35B2Q8TB61 432 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 PRCCQ92733 491 aaPredicted RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 LPPQ93052 612 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 STAMBPL1Q96FJ0 436 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 MCOLN1Q9GZU1 580 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 RAB6CQ9H0N0 254 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 AGO3Q9H9G7 860 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 GGT7Q9UJ14 662 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 KIAA1257Q9ULG3 409 aa11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 LAMA2P24043 3122 aaKnown RBP11.47□□□□□ -0.57
SH3RF1-203ENST00000508685 LRRD1A4D1F6 860 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 C2CD2LO14523 706 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 LUC7L3O95232 432 aaKnown RBP11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 LMNAP02545 664 aaKnown RBP11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 THPOP40225 353 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 TAF6P49848 677 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 LILRA4P59901 499 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 MGAT5Q09328 741 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 PDIA2Q13087 525 aaKnown RBP11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 ACAP1Q15027 740 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 TAF5Q15542 800 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 WASHC2DQ5SRD0 308 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 ADGRD1Q6QNK2 874 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 RSPH3Q86UC2 560 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 GSTCDQ8NEC7 633 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 PYROXD1Q8WU10 500 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 MIEF2Q96C03 454 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 ZNF560Q96MR9 790 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 VPS11Q9H270 941 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 FAM105AQ9NUU6 356 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 PCSK1NQ9UHG2 260 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 STK38LQ9Y2H1 464 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 FARP1Q9Y4F1 1045 aaPredicted RBP11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 TRIM17Q9Y577 477 aa11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.46□□□□□ -0.57
SH3RF1-203ENST00000508685 SGK1O00141 431 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 LIN7AO14910 233 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 GABBR2O75899 941 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 IBSPP21815 317 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 PDE4CQ08493 712 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 MGAT3Q09327 533 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 CBLBQ13191 982 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 DNAJC3Q13217 504 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 OR6B2Q6IFH4 312 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 CCSAPQ6IQ19 270 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 FAM47EQ6ZV65 393 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 PRUNE1Q86TP1 453 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 SCUBE3Q8IX30 993 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 APPL2Q8NEU8 664 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 HAUS1Q96CS2 278 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 PPP1R10Q96QC0 940 aaKnown RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 B3GNT5Q9BYG0 378 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 MYLK2Q9H1R3 596 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 TRMT13Q9NUP7 481 aaKnown RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 GDAP2Q9NXN4 497 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 C3orf70A6NLC5 250 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 E7ESA3 106 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 XPOTO43592 962 aaKnown RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 SPAG7O75391 227 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 SPAG6O75602 509 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 CD48P09326 243 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 ADORA2BP29275 332 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 RPA3P35244 121 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 GNL1P36915 607 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 PNPLA4P41247 253 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 NKX3-2P78367 333 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 STILQ15468 1287 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 TAZQ16635 292 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 C15orf59Q2T9L4 293 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 OLFML1Q6UWY5 402 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 UNC93AQ86WB7 457 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 PDIK1LQ8N165 341 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 KIF2BQ8N4N8 673 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 KLHDC9Q8NEP7 349 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 SLC35F5Q8WV83 523 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 ZNF75CPQ92670 426 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 ERP27Q96DN0 273 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 GAD1Q99259 594 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 DHRS4Q9BTZ2 278 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 FRMD8Q9BZ67 464 aaPredicted RBP11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 ACSS3Q9H6R3 686 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 LNPEPQ9UIQ6 1025 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 RABGEF1Q9UJ41 708 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
SH3RF1-203ENST00000508685 FOXO6A8MYZ6 492 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 MGEA5O60502 916 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 GNRH1P01148 92 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 MIPP30301 263 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 CD52P31358 61 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 CDO1Q16878 200 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 SV2CQ496J9 727 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 ACCSLQ4AC99 568 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 CMPK2Q5EBM0 449 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 PALM2Q8IXS6 379 aa11.44□□□□□ -0.58
SH3RF1-203ENST00000508685 ADGRF2Q8IZF7 708 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms