RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ADCK5Q3MIX3 580 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ANKS6Q68DC2 871 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 DNAJC24Q6P3W2 148 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CHSY1Q86X52 802 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ANKMY2Q8IV38 441 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 C4orf19Q8IY42 314 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NUP93Q8N1F7 819 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CAMKK1Q8N5S9 505 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GBP7Q8N8V2 638 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ASAP3Q8TDY4 903 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 OR8D1Q8WZ84 308 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TRIM11Q96F44 468 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 HHIPQ96QV1 700 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 EIF3CQ99613 913 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PHF7Q9BWX1 381 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MTMR12Q9C0I1 747 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MRPL47Q9HD33 250 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PPP1R14DQ9NXH3 145 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 AFF4Q9UHB7 1163 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZKSCAN5Q9Y2L8 839 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 HES2Q9Y543 173 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ORC6Q9Y5N6 252 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SESN1Q9Y6P5 492 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SPACA6W5XKT8 324 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 A0A1W2PRU2 124 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 OR6C75A6NL08 312 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 H3BNC9 293 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TRDMT1O14717 391 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 P4HA2O15460 535 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 AP5Z1O43299 807 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MYO1DO94832 1006 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 IL1BP01584 269 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SFTPCP11686 197 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 DARSP14868 501 aaKnown RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 IFNAR1P17181 557 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SYT1P21579 422 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SPIRE1Q08AE8 756 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 NCOA4Q13772 614 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 MLF2Q15773 248 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 HECTD3Q5T447 861 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TMEM270Q6UE05 265 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KIAA0319LQ8IZA0 1049 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGAP24Q8N264 748 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 GRK7Q8WTQ7 553 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PRCCQ92733 491 aaPredicted RBP3.07□□□□□ -1.92
NEDD4-208ENST00000508342 PPP1R14AQ96A00 147 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ZFP42Q96MM3 310 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 REEP2Q9BRK0 252 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ELOVL4Q9GZR5 314 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 ADAMTS10Q9H324 1103 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 CATSPERBQ9H7T0 1116 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 TBC1D14Q9P2M4 693 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 EGFL7Q9UHF1 273 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 SORCS3Q9UPU3 1222 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 RPS6KL1Q9Y6S9 549 aa3.07□□□□□ -1.92
NEDD4-208ENST00000508342 KNL1Q8NG31 2342 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CCDC189A1A4V9 331 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SLC38A8A6NNN8 435 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PIK3CDO00329 1044 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 APBB3O95704 486 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TTC4O95801 387 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CPEP16870 476 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CD9P21926 228 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EIF4BP23588 611 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 NMT1P30419 496 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PPP3CCP48454 512 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MNAT1P51948 309 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ARHGDIAP52565 204 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 THOP1P52888 689 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EVX2Q03828 476 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SMARCB1Q12824 385 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ORC1Q13415 861 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TDGQ13569 410 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DSG2Q14126 1118 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RPS6KA1Q15418 735 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 HSDL1Q3SXM5 330 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 FAM43BQ6ZT52 329 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ADHFE1Q8IWW8 467 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DTWD2Q8NBA8 298 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 XXYLT1Q8NBI6 393 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DDX1Q92499 740 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 MYLPFQ96A32 169 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PNKPQ96T60 521 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 EGFL8Q99944 293 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ZMYND12Q9H0C1 365 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 NXF3Q9H4D5 531 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SOHLH2Q9NX45 425 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TSR3Q9UJK0 312 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 JRKLQ9Y4A0 524 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 USH1CQ9Y6N9 552 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CACNA1EQ15878 2313 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SGK1O00141 431 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 SART1O43290 800 aaKnown RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 CYTH3O43739 400 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 RHOCP08134 193 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 PSMA2P25787 234 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 ADCY8P40145 1251 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 TAP1Q03518 808 aa3.06□□□□□ -1.92
NEDD4-208ENST00000508342 NFE2Q16621 373 aaPredicted RBP3.06□□□□□ -1.92
NEDD4-208ENST00000508342 DDR2Q16832 855 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms