RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 ZNF347Q96SE7 839 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 EYA1Q99502 592 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 C1orf50Q9BV19 199 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 NUSAP1Q9BXS6 441 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 GHITMQ9H3K2 345 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 NARFLQ9H6Q4 476 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 SACM1LQ9NTJ5 587 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 EHD3Q9NZN3 535 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 KCND2Q9NZV8 630 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 ENOPH1Q9UHY7 261 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 LAMA4Q16363 1823 aa11.17□□□□□ -0.62
PDLIM5-210ENST00000508216 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ZNF98A6NK75 572 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 LGALS16A8MUM7 142 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 H0YJX3 145 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 E2F3O00716 465 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 CLN5O75503 358 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 TM7SF2O76062 418 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 SLITRK5O94991 958 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 C6orf222P0C671 652 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PRKCIP41743 596 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 BTDP43251 543 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 NPY2RP49146 381 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 AQP4P55087 323 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 IFI35P80217 286 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 GALNT2Q10471 571 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 TLR1Q15399 786 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 TRADDQ15628 312 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 DNAL1Q4LDG9 190 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PXDC1Q5TGL8 231 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PLBD1Q6P4A8 553 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 TMPRSS6Q8IU80 811 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ADGRF2Q8IZF7 708 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ZNF507Q8TCN5 953 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PSPC1Q8WXF1 523 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ISOC1Q96CN7 298 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 HEMGNQ9BXL5 484 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 EMILIN2Q9BXX0 1053 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 SYBUQ9NX95 663 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 RNF112Q9ULX5 631 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PCDHA13Q9Y5I0 950 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 MYH4Q9Y623 1939 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ATP8B3O60423 1300 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 NRCAMQ92823 1304 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 TNPO2O14787 897 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 RAD51BO15315 384 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 GREM1O60565 184 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 DNAJA2O60884 412 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 VNN1O95497 513 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 CAPNS1P04632 268 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 RPA1P27694 616 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PMLP29590 882 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 LRPAP1P30533 357 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 NAMPTP43490 491 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 IL9RQ01113 521 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 CSTF3Q12996 717 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 SSPNQ14714 243 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ESCO2Q56NI9 601 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 MEI1Q5TIA1 1274 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 CACHD1Q5VU97 1274 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 NLRX1Q86UT6 975 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 STK32CQ86UX6 486 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 TSPYL5Q86VY4 417 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 RAVER1Q8IY67 606 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 CCDC36Q8IYA8 594 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PXYLP1Q8TE99 480 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 APOPT1Q96IL0 206 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PIP5K1AQ99755 562 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 CHST12Q9NRB3 414 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ZDHHC18Q9NUE0 388 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 LRWD1Q9UFC0 647 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 AMACRQ9UHK6 382 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ADGRE2Q9UHX3 823 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 PTBP2Q9UKA9 531 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 AP4S1Q9Y587 144 aa11.16□□□□□ -0.62
PDLIM5-210ENST00000508216 ZFYVE16Q7Z3T8 1539 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 PRG4Q92954 1404 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 USP31Q70CQ4 1352 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 RBAK-RBAKDNI3L0D1 243 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 PSMD12O00232 456 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 LAD1O00515 517 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 EDF1O60869 148 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 STAU1O95793 577 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 P4HBP07237 508 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 RAC2P15153 192 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 GDI2P50395 445 aaKnown RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 NKX2-5P52952 324 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 ERVK-21P61565 698 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 POU6F2P78424 691 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 TAF12Q16514 161 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 PFKFB3Q16875 520 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 GTDC1Q4AE62 458 aa11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 TAF1BQ53T94 588 aaPredicted RBP11.15□□□□□ -0.62
PDLIM5-210ENST00000508216 TCP11X2Q5H9J9 407 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms