RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 HSP90AA5PQ58FG0 334 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 LGSNQ5TDP6 509 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 RASSF3Q86WH2 238 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 TEX9Q8N6V9 391 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 C1orf127Q8N9H9 656 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 MORC4Q8TE76 937 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 PPWD1Q96BP3 646 aaKnown RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 ZNF669Q96BR6 464 aaPredicted RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 SDCBP2Q9H190 292 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 ARHGAP28Q9P2N2 729 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 SLC39A10Q9ULF5 831 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 TNRC6CQ9HCJ0 1690 aaKnown RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 C5orf60A6NFR6 353 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 SPECC1L-ADORA2AF8WAN1 911 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 AGRPO00253 132 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 ASS1P00966 412 aaKnown RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 GNAT1P11488 350 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 GPD1P21695 349 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 FGFR3P22607 806 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 ADORA2AP29274 412 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 NAMPTP43490 491 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 NDUFV1P49821 464 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 NEK3P51956 506 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 ANO4Q32M45 955 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 L3MBTL3Q96JM7 780 aaPredicted RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 CADM1Q9BY67 442 aaKnown RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 WDR55Q9H6Y2 383 aaPredicted RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 LRRC4Q9HBW1 653 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 GBA2Q9HCG7 927 aaPredicted RBP9.94□□□□□ -0.82
PHF3-208ENST00000506783 RABGEF1Q9UJ41 708 aa9.94□□□□□ -0.82
PHF3-208ENST00000506783 DFFAO00273 331 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 METTL18O95568 372 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ARL4AP40617 200 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 MMP14P50281 582 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 KLHL38Q2WGJ6 581 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ACSBG2Q5FVE4 666 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 RNASEH2BQ5TBB1 312 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 N4BP2L1Q5TBK1 243 aaPredicted RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 TWF2Q6IBS0 349 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 IFNEQ86WN2 208 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 GSDMBQ8TAX9 411 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 RAB3IL1Q8TBN0 382 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 NAT14Q8WUY8 206 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ERLEC1Q96DZ1 483 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 TMEM176AQ96HP8 235 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 B3GALT6Q96L58 329 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 PEBP4Q96S96 227 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 GMLQ99445 158 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 MRPL45Q9BRJ2 306 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 CDT1Q9H211 546 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 GLTPD2A6NH11 291 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 FZD9O00144 591 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 MED7O43513 233 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 CCDC22O60826 627 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 AMHP03971 560 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 HMBSP08397 361 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 IQCF3P0C7M6 154 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 LMO2P25791 158 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ASPHQ12797 758 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ZNF460Q14592 562 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 MORF4L2Q15014 288 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ZRSR2Q15696 482 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 TMEM259Q4ZIN3 620 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 PLEKHA7Q6IQ23 1121 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 SAMD3Q8N6K7 520 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 SLC7A14Q8TBB6 771 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 TEKT4Q8WW24 435 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 GPRASP2Q96D09 838 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 NMD3Q96D46 503 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 TTC25Q96NG3 672 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 BEGAINQ9BUH8 593 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 SNX25Q9H3E2 840 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 RNPEPL1Q9HAU8 725 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 TAS2R1Q9NYW7 299 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 SMG5Q9UPR3 1016 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 APOBEC2Q9Y235 224 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 CALB2P22676 271 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 MAPK10P53779 464 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 KLC1Q07866 573 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 PDK4Q16654 411 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 STK32AQ8WU08 396 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 SNRNP25Q9BV90 132 aaKnown RBP9.93□□□□□ -0.82
PHF3-208ENST00000506783 NMRK1Q9NWW6 199 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 DPP3Q9NY33 737 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 STOML1Q9UBI4 398 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 SCOCQ9UIL1 159 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 APPL1Q9UKG1 709 aa9.93□□□□□ -0.82
PHF3-208ENST00000506783 ASCC3Q8N3C0 2202 aaKnown RBP9.92□□□□□ -0.82
PHF3-208ENST00000506783 USP54Q70EL1 1684 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 ATP6AP2A0A1C7CYW4 349 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 TBX10O75333 385 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 PMPCBO75439 489 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 ATP6AP2O75787 350 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 CYP1A1P04798 512 aaPredicted RBP9.92□□□□□ -0.82
PHF3-208ENST00000506783 CSH1P0DML2 217 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 CSH2P0DML3 217 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 CYP2F1P24903 491 aa9.92□□□□□ -0.82
PHF3-208ENST00000506783 C1QBPQ07021 282 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms