RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 UNC5AQ6ZN44 842 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 C4orf50Q6ZRC1 276 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 RFX8Q6ZV50 586 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 MOB2Q70IA6 237 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 TTC30AQ86WT1 665 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 CLEC4CQ8WTT0 213 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 SKA1Q96BD8 255 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 FAXDC2Q96IV6 333 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 TUBB6Q9BUF5 446 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 NFKBIZQ9BYH8 718 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 NMUR2Q9GZQ4 415 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 DHX35Q9H5Z1 703 aaKnown RBP7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 TLE6Q9H808 572 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 DCLRE1BQ9H816 532 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 PLAC1Q9HBJ0 212 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.9□□□□□ -1.149e-8■■■■■ 48.4
PPARGC1A-204ENST00000506055 CNTN3Q9P232 1028 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 KIAA1257Q9ULG3 409 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 KAT6AQ92794 2004 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 ANK1P16157 1881 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 EVPLQ92817 2033 aa7.9□□□□□ -1.14
PPARGC1A-204ENST00000506055 A0A0G2JLL6 359 aaPredicted RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 BCLAF3A2AJT9 711 aaKnown RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 FCHO1O14526 889 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 TRDMT1O14717 391 aaKnown RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 HNRNPCL1O60812 293 aaKnown RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 RFPL1O75677 317 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 TOP3BO95985 862 aaKnown RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 APOEP02649 317 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 C1QAP02745 245 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 CSH1P0DML2 217 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 CSH2P0DML3 217 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 CYP2F1P24903 491 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 HDAC4P56524 1084 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 BST1Q10588 318 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC10A2Q12908 348 aaPredicted RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 KPNB1Q14974 876 aaKnown RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 CCDC6Q16204 474 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 MDH1BQ5I0G3 518 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 SLC9A4Q6AI14 798 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 PRRT2Q7Z6L0 340 aaPredicted RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 NUDCD3Q8IVD9 361 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 ARID3BQ8IVW6 561 aaPredicted RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 NDUFAF2Q8N183 169 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 NETO2Q8NC67 525 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 KHSRPQ92945 711 aaKnown RBP eCLIP7.9□□□□□ -1.157e-8■■□□□ 11.4
PPARGC1A-204ENST00000506055 E2F7Q96AV8 911 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 NRDE2Q9H7Z3 1164 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 PNPLA8Q9NP80 782 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 PCMTD2Q9NV79 361 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 PIH1D1Q9NWS0 290 aaKnown RBP7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 DONSONQ9NYP3 566 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 TAS2R1Q9NYW7 299 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 LRRC42Q9Y546 428 aa7.9□□□□□ -1.15
PPARGC1A-204ENST00000506055 DNAJC25-GNG10A0A024R161 153 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 A6NJR5 290 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 PPEF2O14830 753 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 PAPSS1O43252 624 aaPredicted RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 HCRTO43612 131 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DNAJC6O75061 913 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 GABBR2O75899 941 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 KRT38O76015 456 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 LGALS2P05162 132 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 PDHA1P08559 390 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 PDGFRBP09619 1106 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 LCP1P13796 627 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 DESP17661 470 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ABL2P42684 1182 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ERFP50548 548 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 CRADDP78560 199 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 TMEM62Q0P6H9 643 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 TTLL12Q14166 644 aaPredicted RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 SMAD1Q15797 465 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 FAM187BQ17R55 369 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZNF484Q5JVG2 852 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 CES4AQ5XG92 561 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 CASC4Q6P4E1 433 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ZCCHC23Q6ZST2 131 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 UNC5BQ8IZJ1 945 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 GPC2Q8N158 579 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ENDOVQ8N8Q3 282 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 OR6B3Q8NGW1 331 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 RTP4Q96DX8 246 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 SPDL1Q96EA4 605 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 HESX1Q9UBX0 185 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 LOC285556D6RIA3 1793 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 WDR90Q96KV7 1748 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 CENPFP49454 3210 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 LTBP3Q9NS15 1303 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 E7ENQ6 273 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 TSPAN1O60635 241 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 UPP2O95045 317 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ENO1P06733 434 aaKnown RBP7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 PRKCHP24723 683 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 L1CAMP32004 1257 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 AQP5P55064 265 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 KDSRQ06136 332 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 ARHGAP1Q07960 439 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 RCN2Q14257 317 aa7.89□□□□□ -1.15
PPARGC1A-204ENST00000506055 RCN1Q15293 331 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms