RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 SNRNP25Q9BV90 132 aaKnown RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 TRIM62Q9BVG3 475 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 OXCT2Q9BYC2 517 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 TXLNGYQ9BZA5 131 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ULBP1Q9BZM6 244 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ZCWPW1Q9H0M4 648 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 TTYH1Q9H313 450 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 HIPK3Q9H422 1215 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 PCDH18Q9HCL0 1135 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 DMAP1Q9NPF5 467 aaPredicted RBP8.39□□□□□ -1.07
COL4A5-208ENST00000505728 ASIC3Q9UHC3 531 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 DNPEPQ9ULA0 475 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 FAN1Q9Y2M0 1017 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 SCN5AQ14524 2016 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 MICAL3Q7RTP6 2002 aa8.39□□□□□ -1.07
COL4A5-208ENST00000505728 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 GOLGA8KD6RF30 607 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 AGPSO00116 658 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 NRP1O14786 923 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 CAPN9O14815 690 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 B4GALT3O60512 393 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 SYF2O95926 243 aaKnown RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 LTFP02788 710 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 ITGB1P05556 798 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 CD48P09326 243 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 RARGP13631 454 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 TGM2P21980 687 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 BDNFP23560 247 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 IL4RP24394 825 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 STIP1P31948 543 aaKnown RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 L1CAMP32004 1257 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 RDXP35241 583 aaKnown RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 HSD17B3P37058 310 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 GGCXP38435 758 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 FAM193AP78312 1265 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 OTUD4Q01804 1114 aaKnown RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 SMARCB1Q12824 385 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 NOMO1Q15155 1222 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 CCDC142Q17RM4 750 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 RAB6CQ53S08 254 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 ZNF697Q5TEC3 545 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 RHBDF2Q6PJF5 856 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 TMC3Q7Z5M5 1100 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 PCGF5Q86SE9 256 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 OR10T2Q8NGX3 314 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 PIK3R5Q8WYR1 880 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 NDRG1Q92597 394 aaKnown RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 PGAP3Q96FM1 320 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 ZIM3Q96PE6 472 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 KCNK16Q96T55 309 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 CDX2Q99626 313 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 SH3GL2Q99962 352 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 CALN1Q9BXU9 219 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 RAB6CQ9H0N0 254 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 PCDH9Q9HC56 1237 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 TMLHEQ9NVH6 421 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 RCOR3Q9P2K3 495 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 ANAPC5Q9UJX4 755 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 ADAM28Q9UKQ2 775 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 FZD10Q9ULW2 581 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 PRG3Q9Y2Y8 225 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 USP3Q9Y6I4 520 aa8.38□□□□□ -1.07
COL4A5-208ENST00000505728 FNDC1Q4ZHG4 1894 aaPredicted RBP8.38□□□□□ -1.07
COL4A5-208ENST00000505728 BDP1A6H8Y1 2624 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 VWA8A3KMH1 1905 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 NLRC5Q86WI3 1866 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CARNS1A5YM72 827 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 YJEFN3A6XGL0 299 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TBKBP1A7MCY6 615 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 E7ENQ6 273 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 H3BQF6 201 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 H7C4K7 107 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 M0QYT0 321 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 SMAPO00193 183 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 DNALI1O14645 258 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 APOL1O14791 398 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 KIAA0355O15063 1070 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 MCF2LO15068 1137 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 FYNP06241 537 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CLTBP09497 229 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 TFE3P19532 575 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 FGFR3P22607 806 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 ARL4AP40617 200 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 MAGEA11P43364 429 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 NR2C2P49116 596 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 SLC11A1P49279 550 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 ZNF135P52742 658 aaPredicted RBP8.37□□□□□ -1.07
COL4A5-208ENST00000505728 ITGA8P53708 1063 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 PMS2P54278 862 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CACNA2D1P54289 1103 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 CCL23P55773 120 aa8.37□□□□□ -1.07
COL4A5-208ENST00000505728 EIF3BP55884 814 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms