RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 TNFSF9P41273 254 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 WASP42768 502 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 CXADRP78310 365 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ATP2C1P98194 919 aaPredicted RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 SEMG2Q02383 582 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 RTP5Q14D33 572 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ENOX2Q16206 610 aaKnown RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 DDR2Q16832 855 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 CCDC142Q17RM4 750 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 HLA-BQ31612 363 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 TAF1BQ53T94 588 aaPredicted RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 WDR45BQ5MNZ6 344 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 SYCP2LQ5T4T6 812 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 SPATA1Q5VX52 437 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 C9orf57Q5W0N0 161 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 WSCD1Q658N2 575 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 RHBDF2Q6PJF5 856 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 TMPRSS12Q86WS5 348 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 SPACA3Q8IXA5 215 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ETFBKMTQ8IXQ9 262 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ADGRG2Q8IZP9 1017 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 ZNF513Q8N8E2 541 aaPredicted RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 LEO1Q8WVC0 666 aaPredicted RBP7.5□□□□□ -1.21
VCAN-206ENST00000505615 PKMYT1Q99640 499 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 SLC6A17Q9H1V8 727 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 GMIPQ9P107 970 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 NFE2L3Q9Y4A8 694 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 PCDHB5Q9Y5E4 795 aa7.5□□□□□ -1.21
VCAN-206ENST00000505615 CACNA1DQ01668 2161 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 BTBD18B2RXH4 712 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 SLC16A4O15374 487 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 SLC28A2O43868 658 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 DTNBO60941 627 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 PRPF40AO75400 957 aaKnown RBP7.49□□□□□ -1.21
VCAN-206ENST00000505615 NTRK1P04629 796 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 CLTAP09496 248 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 ADH5P11766 374 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 C6P13671 934 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 HDCP19113 662 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 PAX3P23760 479 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 CYP2F1P24903 491 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 BRD2P25440 801 aaKnown RBP7.49□□□□□ -1.21
VCAN-206ENST00000505615 IL12RB1P42701 662 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 CSRP3P50461 194 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 RHDQ02161 417 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 TNP2Q05952 138 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 DOC2BQ14184 412 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 LY6DQ14210 128 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 KCNB1Q14721 858 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 CCDC157Q569K6 752 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 COLEC12Q5KU26 742 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 EGFLAMQ63HQ2 1017 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 ERICH1Q86X53 443 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 KIAA1958Q8N8K9 716 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 IPO4Q8TEX9 1081 aaKnown RBP7.49□□□□□ -1.21
VCAN-206ENST00000505615 TTC9Q92623 222 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 ERLEC1Q96DZ1 483 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 ACOX2Q99424 681 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 CCSER1Q9C0I3 900 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 NRSN2Q9GZP1 204 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 BHMT2Q9H2M3 363 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 KMT5AQ9NQR1 393 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 DSEQ9UL01 958 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 SLCO1B1Q9Y6L6 691 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 KIF26BQ2KJY2 2108 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 PLXNA2O75051 1894 aa7.49□□□□□ -1.21
VCAN-206ENST00000505615 A0A1B0GVT2 93 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 MEI4A8MW99 385 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 CYB561D2O14569 222 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 CPLX1O14810 134 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 TRIM24O15164 1050 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 BCAT2O15382 392 aaPredicted RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 XPOTO43592 962 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 HIP1RO75146 1068 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 NDUFS2O75306 463 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 TULP3O75386 442 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 OLFM2O95897 454 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 NFICP08651 508 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 MAPTP10636 758 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 KRT10P13645 584 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 MUTP22033 750 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 NTSR1P30989 418 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 SLC7A9P82251 487 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 PPP2R3AQ06190 1150 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 CCDC173Q0VFZ6 552 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 JADE1Q6IE81 842 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 IL27RAQ6UWB1 636 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 ZPBP2Q6X784 338 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 TRMT11Q7Z4G4 463 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 DCP1BQ8IZD4 617 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 TERB1Q8NA31 727 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 TMEM161BQ8NDZ6 487 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 MRGPRX1Q96LB2 322 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 MDFIQ99750 246 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 PYM1Q9BRP8 204 aaKnown RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 RUSC1Q9BVN2 902 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 ABCB6Q9NP58 842 aa7.48□□□□□ -1.21
VCAN-206ENST00000505615 WSB2Q9NYS7 404 aaPredicted RBP7.48□□□□□ -1.21
VCAN-206ENST00000505615 USP36Q9P275 1121 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms