RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 A0A1W2PQH9 124 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 ANKRD62A6NC57 917 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 FAM170BA6NMN3 283 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 F8VZ95 297 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 SPECC1L-ADORA2AF8WAN1 911 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 RNF225M0QZC1 329 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 ARNTLO00327 626 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 ZBTB24O43167 697 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 HSF2BPO75031 334 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 PRAMEF12O95522 483 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 LCP1P13796 627 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 CDH5P33151 784 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 SLC11A2P49281 568 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 CDK17Q00537 523 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 UBXN2BQ14CS0 331 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 PMF1Q6P1K2 205 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 MSANTD2Q6P1R3 559 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 SND1Q7KZF4 910 aaKnown RBP eCLIP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 TRMT11Q7Z4G4 463 aaKnown RBP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 ERICH1Q86X53 443 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 ADGRG2Q8IZP9 1017 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 TFAP2BQ92481 460 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 CLDN23Q96B33 292 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 C18orf8Q96DM3 657 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 VCPIP1Q96JH7 1222 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 NCAPGQ9BPX3 1015 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 KLF16Q9BXK1 252 aaPredicted RBP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 SLC2A11Q9BYW1 496 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 RNF38Q9H0F5 515 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 SIX2Q9NPC8 291 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 HEBP1Q9NRV9 189 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.31□□□□□ -0.76
NR1I3-220ENST00000505005 CFAP97Q9P2B7 532 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 FBXO4Q9UKT5 387 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 TECTAO75443 2155 aa10.31□□□□□ -0.76
NR1I3-220ENST00000505005 A0A1W2PQJ5 194 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 KRBA1A5PL33 1030 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 LAMTOR5O43504 91 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CALB1P05937 261 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 NCAM1P13591 858 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CTHP32929 405 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CLCN1P35523 988 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CCR3P51677 355 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 OXCT1P55809 520 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CDR2Q01850 454 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 PDCLQ13371 301 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 NR1I3Q14994 352 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CCDC142Q17RM4 750 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 EML3Q32P44 896 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 ZNF528Q3MIS6 628 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 MPP7Q5T2T1 576 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CCDC105Q8IYK2 499 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CPXM2Q8N436 756 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 SYN2Q92777 582 aaPredicted RBP10.3□□□□□ -0.76
NR1I3-220ENST00000505005 KHSRPQ92945 711 aaKnown RBP eCLIP10.3□□□□□ -0.76
NR1I3-220ENST00000505005 KAT5Q92993 513 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CD101Q93033 1021 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 ACDQ96AP0 544 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 ELMO3Q96BJ8 720 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 FAM149B1Q96BN6 582 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 P2RY13Q9BPV8 354 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 RETREG1Q9H6L5 497 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CCSER2Q9H7U1 834 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 CBX8Q9HC52 389 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 SPHK2Q9NRA0 654 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 TMEM30AQ9NV96 361 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 RASAL2Q9UJF2 1139 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 SIK3Q9Y2K2 1263 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 FHOD1Q9Y613 1164 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 HELZP42694 1942 aaKnown RBP10.3□□□□□ -0.76
NR1I3-220ENST00000505005 C5orf42Q9H799 3197 aa10.3□□□□□ -0.76
NR1I3-220ENST00000505005 TIMM44O43615 452 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 APOEP02649 317 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 APODP05090 189 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 ADH5P11766 374 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 GJA4P35212 333 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 NOS2P35228 1153 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 TNFRSF4P43489 277 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 NSFP46459 744 aaKnown RBP10.29□□□□□ -0.76
NR1I3-220ENST00000505005 GABRB2P47870 512 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 JAM2P57087 298 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 FANCCQ00597 558 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SLC6A3Q01959 620 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 EFEMP1Q12805 493 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 TRIP4Q15650 581 aaPredicted RBP10.29□□□□□ -0.76
NR1I3-220ENST00000505005 MPPE1Q53F39 396 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SDE2Q6IQ49 451 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SLC26A9Q7LBE3 791 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SCD5Q86SK9 330 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SLC47A2Q86VL8 602 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 SPEM1Q8N4L4 309 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 ATP6V0D2Q8N8Y2 350 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 DTWD2Q8NBA8 298 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 UCMAQ8WVF2 138 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 TRIM11Q96F44 468 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 PNKPQ96T60 521 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 GANQ9H2C0 597 aa10.29□□□□□ -0.76
NR1I3-220ENST00000505005 EBF3Q9H4W6 596 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms