RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PIGVQ9NUD9 493 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 GPATCH2LQ9NWQ4 482 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 COMMD8Q9NX08 183 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 GMIPQ9P107 970 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 RNF14Q9UBS8 474 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 FBXW11Q9UKB1 542 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 NEU3Q9UQ49 428 aa10.85□□□□□ -0.67
TPM3-217ENST00000504663 C2orf71A6NGG8 1288 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 EFCAB8A8MWE9 144 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 MDM4O15151 490 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 GRM6O15303 877 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 IRAK2O43187 625 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 FGGP02679 453 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 GJC1P36383 396 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 ERVK-21P61565 698 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 SEMA3BQ13214 749 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 PPP2R5EQ16537 467 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 CYP1B1Q16678 543 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 DCAF6Q58WW2 860 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 KIAA1841Q6NSI8 718 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 SPOCD1Q6ZMY3 1216 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 DENND5BQ6ZUT9 1274 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 TCEAL8Q8IYN2 117 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 POF1BQ8WVV4 589 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 TEKT4Q8WW24 435 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 EDEM1Q92611 657 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 CASP10Q92851 521 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 MYRFLQ96LU7 910 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 KCTD15Q96SI1 283 aaPredicted RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 LRRC3Q9BY71 257 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 EPC1Q9H2F5 836 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 PRO3102Q9H379 93 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 ANKZF1Q9H8Y5 726 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 NGRNQ9NPE2 291 aaKnown RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 MRPL17Q9NRX2 175 aaKnown RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 STK39Q9UEW8 545 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM3-217ENST00000504663 PCSK1NQ9UHG2 260 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 R3HDM2Q9Y2K5 976 aaKnown RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 FARP1Q9Y4F1 1045 aaPredicted RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 PCDHA11Q9Y5I1 949 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 INSL5Q9Y5Q6 135 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 V9GYY5 206 aaPredicted RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 CDH23Q9H251 3354 aa10.84□□□□□ -0.67
TPM3-217ENST00000504663 HELZP42694 1942 aaKnown RBP10.84□□□□□ -0.67
TPM3-217ENST00000504663 UQCRHLA0A096LP55 91 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 CTAGE15A4D2H0 777 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 TGM5O43548 720 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 RTN3O95197 1032 aaPredicted RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 RB1P06400 928 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 UQCRHP07919 91 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 CTAGE8P0CG41 777 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 RALAP11233 206 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 NCAM1P13591 858 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 KDELR1P24390 212 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 YWHAQP27348 245 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 RDXP35241 583 aaKnown RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 CXCR3P49682 368 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 RPL10AP62906 217 aaKnown RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 KRT17Q04695 432 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 UBE3AQ05086 875 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 SCAPQ12770 1279 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 IFRD2Q12894 506 aaPredicted RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 DPYSL2Q16555 572 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 SNX30Q5VWJ9 437 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 TTC27Q6P3X3 843 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 TMEM150AQ86TG1 271 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 CTAGE6Q86UF2 777 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 FAM131BQ86XD5 332 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 TMC8Q8IU68 726 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 CTAGE4Q8IX94 777 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 C12orf50Q8NA57 414 aaPredicted RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 GIPC2Q8TF65 315 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 NTAN1Q96AB6 310 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 SLC39A13Q96H72 371 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 TCF25Q9BQ70 676 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 AP1M1Q9BXS5 423 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 PBX4Q9BYU1 374 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 OSBPL8Q9BZF1 889 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 ZWILCHQ9H900 591 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 PCDH18Q9HCL0 1135 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 ZNF334Q9HCZ1 680 aaPredicted RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.83□□□□□ -0.68
TPM3-217ENST00000504663 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
TPM3-217ENST00000504663 FZD10Q9ULW2 581 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 MAFFQ9ULX9 164 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 NR2E3Q9Y5X4 410 aa10.83□□□□□ -0.68
TPM3-217ENST00000504663 DOCK6Q96HP0 2047 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.82□□□□□ -0.68
TPM3-217ENST00000504663 ZNF487B1APH4 448 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 H0YGN5 161 aa10.82□□□□□ -0.68
TPM3-217ENST00000504663 M0QYT0 321 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms