RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 KIAA1257Q9ULG3 409 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SLC12A4Q9UP95 1085 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 SNX9Q9Y5X1 595 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 LTBP2Q14767 1821 aa7.33□□□□□ -1.24
SNX25-202ENST00000504273 COL4A4P53420 1690 aaPredicted RBP7.33□□□□□ -1.24
SNX25-202ENST00000504273 DYNC1LI2O43237 492 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 GHRP10912 638 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 DARSP14868 501 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 SLC6A3Q01959 620 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 PLCB3Q01970 1234 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 RASA2Q15283 850 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 DCAF4L1Q3SXM0 396 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 OTUD1Q5VV17 481 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 SLC9A4Q6AI14 798 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SH2D5Q6ZV89 423 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 PLEKHH3Q7Z736 793 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 DPP9Q86TI2 863 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 CCDC197Q8NCU1 140 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 USP6NLQ92738 828 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 RTP4Q96DX8 246 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 PARK7Q99497 189 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 FAM124BQ9H5Z6 455 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 SYNCQ9H7C4 482 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 KCNK9Q9NPC2 374 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 EXOC1LA0A1B0GW35 172 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 POC1B-GALNT4F8VUJ3 575 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 PRPF4O43172 522 aaKnown RBP eCLIP7.32□□□□□ -1.24
SNX25-202ENST00000504273 TREHO43280 583 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 AVILO75366 819 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 RECQL4O94761 1208 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 VIMP08670 466 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 RBP3P10745 1247 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 CCDC130P13994 396 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 TKTP29401 623 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 RPA3P35244 121 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 CDH6P55285 790 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 ATP11AP98196 1134 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SHHQ15465 462 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 CCL14Q16627 93 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 CDO1Q16878 200 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SYCP2LQ5T4T6 812 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 ARHGAP17Q68EM7 881 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 C1orf228Q6PIY5 440 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 FAM228AQ86W67 206 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SMG8Q8ND04 991 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 SPATA18Q8TC71 538 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SNRNP25Q9BV90 132 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 CALN1Q9BXU9 219 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 PHACTR1Q9C0D0 580 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 C12orf65Q9H3J6 166 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 RSAD1Q9HA92 442 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 GOLGA2P5Q9HBQ8 144 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 KLK14Q9P0G3 267 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 GGT7Q9UJ14 662 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 MFHAS1Q9Y4C4 1052 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SMIM28A0A1B0GU29 152 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SMIM35A0A1B0GVV1 85 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 EME2A4GXA9 379 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 RASA4BC9J798 803 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 RASA4O43374 803 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 HOXC8P31273 242 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 L1CAMP32004 1257 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 HIF1AQ16665 826 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 FAM110CQ1W6H9 321 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 KIAA0319Q5VV43 1072 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 ADGRD1Q6QNK2 874 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 ZC3H18Q86VM9 953 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 OSTM1Q86WC4 334 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 RIBC1Q8N443 379 aaPredicted RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 FBXO36Q8NEA4 188 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 FAM172AQ8WUF8 416 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 DNAJB3Q8WWF6 145 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 NDRG1Q92597 394 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 RMDN2Q96LZ7 410 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 MAGEB18Q96M61 343 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 TTC25Q96NG3 672 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 SLC40A1Q9NP59 571 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 CPSF2Q9P2I0 782 aaKnown RBP7.32□□□□□ -1.24
SNX25-202ENST00000504273 GTF2IRD1Q9UHL9 959 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 USP3Q9Y6I4 520 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 TEX264Q9Y6I9 313 aa7.32□□□□□ -1.24
SNX25-202ENST00000504273 COL6A3P12111 3177 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 SLC15A5A6NIM6 579 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 RNF8O76064 485 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 KIAA0754O94854 1291 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 MAP3K6O95382 1288 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 P4HA1P13674 534 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 SLC18A1P54219 525 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 SNX17Q15036 470 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 CCDC121Q6ZUS5 278 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 PAQR9Q6ZVX9 377 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 CENPUQ71F23 418 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 ZNF534Q76KX8 674 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 PRPF39Q86UA1 669 aaKnown RBP7.31□□□□□ -1.24
SNX25-202ENST00000504273 CAND1Q86VP6 1230 aaKnown RBP7.31□□□□□ -1.24
SNX25-202ENST00000504273 C4orf33Q8N1A6 199 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 CRYBG2Q8N1P7 616 aa7.31□□□□□ -1.24
SNX25-202ENST00000504273 LRRC52Q8N7C0 313 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms