RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PDZD7Q9H5P4 517 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 CPNE5Q9HCH3 593 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 TM7SF3Q9NS93 570 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 TDP1Q9NUW8 608 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 DNAAF2Q9NVR5 837 aaKnown RBP5.47□□□□□ -1.53
HTT-202ENST00000502820 ETAA1Q9NY74 926 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 CTNNAL1Q9UBT7 734 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 IL17BQ9UHF5 180 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 SAR1BQ9Y6B6 198 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 ITPR1Q14643 2758 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 EVPLQ92817 2033 aa5.47□□□□□ -1.53
HTT-202ENST00000502820 SMIM28A0A1B0GU29 152 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 A0A1W2PQC6 194 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 GOLGA6L10A6NI86 522 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 K7EQS6 105 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 ERVH48-1M5A8F1 160 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SGK1O00141 431 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PDLIM1O00151 329 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 LAD1O00515 517 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 KCNK3O14649 394 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SYN3O14994 580 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 AHCYL1O43865 530 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PPP1R37O75864 691 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 DNAJC8O75937 253 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 FGF19O95750 216 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 EDN1P05305 212 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CKMP06732 381 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PAEPP09466 180 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 C6P13671 934 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 HNRNPLP14866 589 aaKnown RBP eCLIP5.46□□□□□ -1.54
HTT-202ENST00000502820 CDC25CP30307 473 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CYLC1P35663 651 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 NAMPTP43490 491 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CSRP3P50461 194 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CLNS1AP54105 237 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 NAP1L1P55209 391 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 GNGT1P63211 74 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 ATP2C1P98194 919 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 CDK17Q00537 523 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 NFKB2Q00653 900 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 IL9RQ01113 521 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 KDSRQ06136 332 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SOX4Q06945 474 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 KCNH2Q12809 1159 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 MYO1EQ12965 1108 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 DMP1Q13316 513 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 XRCC4Q13426 336 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 MTF1Q14872 753 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PDGFRLQ15198 375 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 NAB2Q15742 525 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CMPK2Q5EBM0 449 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 ZNF569Q5MCW4 686 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 EOGTQ5NDL2 527 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 HYIQ5T013 277 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 BROXQ5VW32 411 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SPATA1Q5VX52 437 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 EEF1DP3Q658K8 133 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 FAM173BQ6P4H8 233 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PADI6Q6TGC4 694 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PCSK4Q6UW60 755 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CD300LGQ6UXG3 332 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SLC36A4Q6YBV0 504 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 RASSF3Q86WH2 238 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SFTPA1Q8IWL2 248 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PARP9Q8IXQ6 854 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 TMEM130Q8N3G9 435 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 ZCCHC9Q8N567 271 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 TEX9Q8N6V9 391 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 GBP7Q8N8V2 638 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 LSM14AQ8ND56 463 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 TRIM58Q8NG06 486 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 DEPTORQ8TB45 409 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SNX19Q92543 992 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 MRPS31Q92665 395 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 USP13Q92995 863 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 ATP2A3Q93084 1043 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PSMG2Q969U7 264 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 SAAL1Q96ER3 474 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 GSDMAQ96QA5 445 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CYP2S1Q96SQ9 504 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CDC6Q99741 560 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 MMTAG2Q9BU76 263 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.46□□□□□ -1.54
HTT-202ENST00000502820 NUP58Q9BVL2 599 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 LRRC3Q9BY71 257 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 LINC00597Q9H2U6 94 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 CNOT10Q9H9A5 744 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 CAPN10Q9HC96 672 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 POLD4Q9HCU8 107 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 PRMT7Q9NVM4 692 aaPredicted RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 OBP2AQ9NY56 170 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 DKK4Q9UBT3 224 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 MMP17Q9ULZ9 603 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 NFE2L3Q9Y4A8 694 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 GREB1Q4ZG55 1949 aa5.46□□□□□ -1.54
HTT-202ENST00000502820 MYH9P35579 1960 aaKnown RBP5.46□□□□□ -1.54
HTT-202ENST00000502820 WDR81Q562E7 1941 aa5.45□□□□□ -1.54
HTT-202ENST00000502820 A0A1B0GVL5 298 aa5.45□□□□□ -1.54
HTT-202ENST00000502820 ARHGEF35A5YM69 484 aa5.45□□□□□ -1.54
HTT-202ENST00000502820 MYMKA6NI61 221 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms