RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 EDEM1Q92611 657 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 CHFRQ96EP1 664 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 IER2Q9BTL4 223 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 PDCL3Q9H2J4 239 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
HSPG2-213ENST00000498495 PCDHGC3Q9UN70 934 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 ZNF510Q9Y2H8 683 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
HSPG2-213ENST00000498495 ZDBF2Q9HCK1 2354 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 STC2O76061 302 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 PNMA6AP0CW24 399 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 CXCL12P48061 93 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 RPL34P49207 117 aaKnown RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 CCINQ13939 588 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 PPP2R5DQ14738 602 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 ANO4Q32M45 955 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 FSTL4Q6MZW2 842 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 BHLHA9Q7RTU4 235 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 TMEM110Q86TL2 294 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 DHX40Q8IX18 779 aaKnown RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 CLEC4CQ8WTT0 213 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 NOX5Q96PH1 765 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 NAA15Q9BXJ9 866 aaKnown RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 SLC4A5Q9BY07 1137 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 DCLK3Q9C098 648 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 LHX5Q9H2C1 402 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 HSD3B7Q9H2F3 369 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 SPHK2Q9NRA0 654 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 FAM207AQ9NSI2 230 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 FAM86C1Q9NVL1 165 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 SFMBT1Q9UHJ3 866 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 FBXO4Q9UKT5 387 aa13.4□□□□□ -0.26
HSPG2-213ENST00000498495 HELZP42694 1942 aaKnown RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 KIF26AQ9ULI4 1882 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-213ENST00000498495 LGALS16A8MUM7 142 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 SART1O43290 800 aaKnown RBP13.39□□□□□ -0.27
HSPG2-213ENST00000498495 GREM1O60565 184 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 ATG13O75143 517 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 EGFP01133 1207 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 LTFP02788 710 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 SP9P0CG40 484 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 ADH5P11766 374 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 ATP1A3P13637 1013 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 CYP11B1P15538 503 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 CHKAP35790 457 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 OPRD1P41143 372 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 SLC6A11P48066 632 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 KLK7P49862 253 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 CCR3P51677 355 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 SNX16P57768 344 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
HSPG2-213ENST00000498495 SYCP1Q15431 976 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 FBXO43Q4G163 708 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 NAIF1Q69YI7 327 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-213ENST00000498495 TPGS1Q6ZTW0 290 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 TMEM25Q86YD3 366 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 PASD1Q8IV76 773 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 MAML2Q8IZL2 1156 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-213ENST00000498495 SPEM1Q8N4L4 309 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 WDTC1Q8N5D0 677 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 NAT16Q8N8M0 369 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 NEK11Q8NG66 645 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 CCDC26Q8TAB7 109 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 FAM149B1Q96BN6 582 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 PPP1R13BQ96KQ4 1090 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 PNKPQ96T60 521 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 FUCA2Q9BTY2 467 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 NLRC4Q9NPP4 1024 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 DAAM1Q9Y4D1 1078 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 CEP83Q9Y592 693 aa13.39□□□□□ -0.27
HSPG2-213ENST00000498495 E5RJQ4 531 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 CAPN9O14815 690 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 KLKB1P03952 638 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 NCAM1P13591 858 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 EIF2DP41214 584 aaKnown RBP13.38□□□□□ -0.27
HSPG2-213ENST00000498495 HARS2P49590 506 aaKnown RBP13.38□□□□□ -0.27
HSPG2-213ENST00000498495 PDCLQ13371 301 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 GAS6Q14393 721 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 GAB4Q2WGN9 574 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 PREPLQ4J6C6 727 aaPredicted RBP13.38□□□□□ -0.27
HSPG2-213ENST00000498495 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 Q6ZNB5 142 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 Q6ZS52 159 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 DENND1CQ8IV53 801 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 PLD4Q96BZ4 506 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
HSPG2-213ENST00000498495 SPAG5Q96R06 1193 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 ERGIC2Q96RQ1 377 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 GANQ9H2C0 597 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 WDR35Q9P2L0 1181 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 SIK3Q9Y2K2 1263 aa13.38□□□□□ -0.27
HSPG2-213ENST00000498495 HBS1LQ9Y450 684 aaKnown RBP13.38□□□□□ -0.27
HSPG2-213ENST00000498495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 F8VZ95 297 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 PAPSS1O43252 624 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms