RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 SYNPOQ8N3V7 929 aa17.5■□□□□ 0.39
ABCF3-218ENST00000498136 PHOX2BQ99453 314 aa17.5■□□□□ 0.39
ABCF3-218ENST00000498136 FBRSL1Q9HCM7 1045 aaKnown RBP17.5■□□□□ 0.39
ABCF3-218ENST00000498136 ATG2BQ96BY7 2078 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 SMTNL1A8MU46 457 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 GABBR2O75899 941 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 STC2O76061 302 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 LTFP02788 710 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 UCHL3P15374 230 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 KRT9P35527 623 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 BPIFB4P59827 614 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 GAD2Q05329 585 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 MEA1Q16626 185 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 TSSK4Q6SA08 328 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 TPGS1Q6ZTW0 290 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 FMNL3Q8IVF7 1028 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 MAML2Q8IZL2 1156 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-218ENST00000498136 SCML4Q8N228 414 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 SPEM1Q8N4L4 309 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 CLEC4CQ8WTT0 213 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 IRGQQ8WZA9 623 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 PDCL3Q9H2J4 239 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 SPHK2Q9NRA0 654 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 FAM207AQ9NSI2 230 aaPredicted RBP17.49■□□□□ 0.39
ABCF3-218ENST00000498136 LIMA1Q9UHB6 759 aaKnown RBP17.49■□□□□ 0.39
ABCF3-218ENST00000498136 FBXO4Q9UKT5 387 aa17.49■□□□□ 0.39
ABCF3-218ENST00000498136 SYCE3A1L190 88 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 RNF40O75150 1001 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 CORO1AP31146 461 aaKnown RBP17.48■□□□□ 0.39
ABCF3-218ENST00000498136 CLCN1P35523 988 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 OPRD1P41143 372 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 CXCL12P48061 93 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 KLK7P49862 253 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 UBXN1Q04323 297 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 GAS6Q14393 721 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 NCAPHQ15003 741 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 FBXO43Q4G163 708 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 DPY19L2P1Q6NXN4 242 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 SLC47A2Q86VL8 602 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 SCUBE3Q8IX30 993 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 FAM71AQ8IYT1 594 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 NAT16Q8N8M0 369 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 FAM149B1Q96BN6 582 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 DCLK3Q9C098 648 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 PLCB1Q9NQ66 1216 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 SFMBT1Q9UHJ3 866 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 ZNF510Q9Y2H8 683 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 CEP83Q9Y592 693 aa17.48■□□□□ 0.39
ABCF3-218ENST00000498136 E5RJQ4 531 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 NEDD8-MDP1E9PL57 170 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 SART1O43290 800 aaKnown RBP17.47■□□□□ 0.39
ABCF3-218ENST00000498136 GREM1O60565 184 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 NCAM1P13591 858 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 SLC6A11P48066 632 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 ZNF165P49910 485 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 POLR2FP61218 127 aaKnown RBP17.47■□□□□ 0.39
ABCF3-218ENST00000498136 SATB1Q01826 763 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 KDSRQ06136 332 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 GAB4Q2WGN9 574 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 SMYD5Q6GMV2 418 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 ZC3H14Q6PJT7 736 aaKnown RBP17.47■□□□□ 0.39
ABCF3-218ENST00000498136 C12orf40Q86WS4 652 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 TMEM25Q86YD3 366 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 STK32AQ8WU08 396 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 NOX5Q96PH1 765 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 PNKPQ96T60 521 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 BPIFA3Q9BQP9 254 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 BBS2Q9BXC9 721 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 PRMT8Q9NR22 394 aaPredicted RBP17.47■□□□□ 0.39
ABCF3-218ENST00000498136 CYTH4Q9UIA0 394 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 PCDHGC3Q9UN70 934 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 R4GN57 208 aa17.47■□□□□ 0.39
ABCF3-218ENST00000498136 LGALS16A8MUM7 142 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.46■□□□□ 0.39
ABCF3-218ENST00000498136 CAPN9O14815 690 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 ATG13O75143 517 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 APODP05090 189 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 ATP1A3P13637 1013 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 ZNF18P17022 549 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 NBL1P41271 181 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 HARS2P49590 506 aaKnown RBP17.46■□□□□ 0.39
ABCF3-218ENST00000498136 SEC13P55735 322 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 PDCLQ13371 301 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 SYCP1Q15431 976 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 ZNF528Q3MIS6 628 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 Q6ZNB5 142 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 ALYREFQ86V81 257 aaKnown RBP17.46■□□□□ 0.39
ABCF3-218ENST00000498136 DENND1CQ8IV53 801 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 DHX40Q8IX18 779 aaKnown RBP17.46■□□□□ 0.39
ABCF3-218ENST00000498136 NEK11Q8NG66 645 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 RPLP0P6Q8NHW5 317 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 BHMTQ93088 406 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 SPAG5Q96R06 1193 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 NAA15Q9BXJ9 866 aaKnown RBP17.46■□□□□ 0.39
ABCF3-218ENST00000498136 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 STK33Q9BYT3 514 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 GANQ9H2C0 597 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 NLRC4Q9NPP4 1024 aa17.46■□□□□ 0.39
ABCF3-218ENST00000498136 KIAA1549LQ6ZVL6 1849 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms