RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 WDR47O94967 919 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 NDST3O95803 873 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 MT-CO3P00414 261 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 CHRM5P08912 532 aaPredicted RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 IFIT2P09913 472 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 NHLRC4P0CG21 123 aaPredicted RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 ADRA1DP25100 572 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 YY1P25490 414 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 EEF1GP26641 437 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 GABRB3P28472 473 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 SLC5A2P31639 672 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 MCM5P33992 734 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 HTR7P34969 479 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 COPB1P53618 953 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 BTKQ06187 659 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 FHL3Q13643 280 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ACOX1Q15067 660 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 SLC35G1Q2M3R5 365 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 CERKLQ49MI3 558 aaPredicted RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 EPHA10Q5JZY3 1008 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 KIAA1614Q5VZ46 1190 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ABLIM2Q6H8Q1 611 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ZNF782Q6ZMW2 699 aaPredicted RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 CHSY1Q86X52 802 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 CCDC28AQ8IWP9 274 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 PNPLA1Q8N8W4 532 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 PNLDC1Q8NA58 520 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 ACRBPQ8NEB7 543 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 DEPTORQ8TB45 409 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ADAMTS18Q8TE60 1221 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 GJA10Q969M2 543 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 CCDC17Q96LX7 622 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ASB2Q96Q27 587 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ELAC2Q9BQ52 826 aaKnown RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 ZNF700Q9H0M5 742 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 PCDHAC1Q9H158 963 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 NLRC4Q9NPP4 1024 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ASIC5Q9NY37 505 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 RGL1Q9NZL6 768 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 ZMYND8Q9ULU4 1186 aaPredicted RBP3.38□□□□□ -1.87
RIF1-212ENST00000498041 FRMD4BQ9Y2L6 1034 aa3.38□□□□□ -1.87
RIF1-212ENST00000498041 WDR97A6NE52 1622 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 ARAP1Q96P48 1450 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 TCRBV5S1A1TA0A578 114 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 ARP10275 920 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 APEHP13798 732 aaKnown RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 EGR1P18146 543 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 MST1P26927 711 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 HSPA7P48741 367 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 DGKQP52824 942 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 TXNL4AP83876 142 aaKnown RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 CFHR3Q02985 330 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 DEUP1Q05D60 604 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 SRSF4Q08170 494 aaKnown RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 MTAPQ13126 283 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 HDAC1Q13547 482 aaPredicted RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 ATP1A4Q13733 1029 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 MAPKAPK3Q16644 382 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 FAM187BQ17R55 369 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 SLC5A9Q2M3M2 681 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 DGKKQ5KSL6 1271 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 RAP1GAP2Q684P5 730 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 FBXO38Q6PIJ6 1188 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 P3H2Q8IVL5 708 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 SRRM1Q8IYB3 904 aaKnown RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 LINC01465Q8N7H1 131 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 C12orf76Q8N812 135 aaPredicted RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 FAM71DQ8N9W8 422 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 GLIS1Q8NBF1 620 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 KIAA1191Q96A73 305 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 RITA1Q96K30 269 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 SGCZQ96LD1 299 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 CINPQ9BW66 212 aaPredicted RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 SEMA4CQ9C0C4 833 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.37□□□□□ -1.871e-15■■□□□ 12.2
RIF1-212ENST00000498041 CHST12Q9NRB3 414 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 TM7SF3Q9NS93 570 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 GAR1Q9NY12 217 aaKnown RBP3.37□□□□□ -1.87
RIF1-212ENST00000498041 FLRT1Q9NZU1 646 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 FNIP2Q9P278 1114 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 ASAP1Q9ULH1 1129 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 DNMBPQ6XZF7 1577 aa3.37□□□□□ -1.87
RIF1-212ENST00000498041 CEP162Q5TB80 1403 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 CEP164Q9UPV0 1460 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 CCDC194A0A1B0GVG4 234 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 FAM234BA2RU67 622 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 OR2W5A6NFC9 320 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 TMEM232C9JQI7 657 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 H3BNC9 293 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 PODXLO00592 558 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 ZSCAN9O15535 394 aaPredicted RBP3.36□□□□□ -1.87
RIF1-212ENST00000498041 PLA2G6O60733 806 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 USP1O94782 785 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 LATS1O95835 1130 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 VIPP01282 170 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 CERS1P27544 350 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 PBX1P40424 430 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 NSUN2Q08J23 767 aaKnown RBP eCLIP3.36□□□□□ -1.87
RIF1-212ENST00000498041 FOXF2Q12947 444 aa3.36□□□□□ -1.87
RIF1-212ENST00000498041 DNASE1L3Q13609 305 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms