RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 HIBCHQ6NVY1 386 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 CPLX2Q6PUV4 134 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 NEK10Q6ZWH5 1172 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PLPPR4Q7Z2D5 763 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ABI1Q8IZP0 508 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ZNF655Q8N720 491 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PPM1NQ8N819 430 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 RCBTB1Q8NDN9 531 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 NSUN7Q8NE18 718 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 RDM1Q8NG50 284 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PHOSPHO2Q8TCD6 241 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 SEPT1Q8WYJ6 367 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 CENPIQ92674 756 aaPredicted RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 CCDC120Q96HB5 630 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 NELL2Q99435 816 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PCYT2Q99447 389 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 MCMBPQ9BTE3 642 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 HDAC8Q9BY41 377 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 TRPV6Q9H1D0 765 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 MTIF3Q9H2K0 278 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 BCAS3Q9H6U6 928 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 MLXIPQ9HAP2 919 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ANKEF1Q9NU02 776 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 DACT1Q9NYF0 836 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 CLEC1BQ9P126 229 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 LRFN1Q9P244 771 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PPARGC1AQ9UBK2 798 aaKnown RBP6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 GRHPRQ9UBQ7 328 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 SLC9A2Q9UBY0 812 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 DUSP13Q9UII6 198 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 ACAD8Q9UKU7 415 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 SIK3Q9Y2K2 1263 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 NUB1Q9Y5A7 615 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PCDHA2Q9Y5H9 948 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 SQORQ9Y6N5 450 aa6.4□□□□□ -1.38
TMEM39A-212ENST00000497993 PLXNA4Q9HCM2 1894 aa6.4□□□□□ -1.39
TMEM39A-212ENST00000497993 EYSQ5T1H1 3165 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SHISA3A0PJX4 238 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 A6NLC8 198 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 RBAK-RBAKDNI3L0D1 243 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 APOL1O14791 398 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TIPRLO75663 272 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 IL18RAPO95256 599 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 ESR1P03372 595 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SMIM10L2AP0DMW4 78 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SMIM10L2BP0DMW5 78 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 GNAT1P11488 350 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CYP2C9P11712 490 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CKBP12277 381 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 GCFC2P16383 781 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TSHRP16473 764 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 KRT15P19012 456 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CYP2C18P33260 490 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TCF7P36402 384 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 ALDH9A1P49189 494 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 BCAR1P56945 870 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 ROR1Q01973 937 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 AKAP17AQ02040 695 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 MGAT3Q09327 533 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SNW1Q13573 536 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 PSMD6Q15008 389 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 POSTNQ15063 836 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 PTGISQ16647 500 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 Q4G0T1 1027 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CCDC157Q569K6 752 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SLC45A4Q5BKX6 768 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 EEF1DP3Q658K8 133 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TAF2Q6P1X5 1199 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TMCO3Q6UWJ1 677 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 ABHD15Q6UXT9 468 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 LRRC8DQ7L1W4 858 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CXorf67Q86X51 503 aaPredicted RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CREG2Q8IUH2 290 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TMTC1Q8IUR5 882 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 BLIDQ8IZY5 108 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 GALNT15Q8N3T1 639 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CYP2W1Q8TAV3 490 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 PIBF1Q8WXW3 757 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 AUTS2Q8WXX7 1259 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 GOLGA1Q92805 767 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 NELL1Q92832 810 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 RIT2Q99578 217 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CHCHD6Q9BRQ6 235 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 LLPHQ9BRT6 129 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 RNPEPQ9H4A4 650 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SMARCAD1Q9H4L7 1026 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 CARS2Q9HA77 564 aaKnown RBP6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 SMURF1Q9HCE7 757 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 VPS45Q9NRW7 570 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 MTMR10Q9NXD2 777 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 ERAP1Q9NZ08 941 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 EDARQ9UNE0 448 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 TELO2Q9Y4R8 837 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 UNC80Q8N2C7 3258 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 A0A0C4DFX4 3053 aa6.39□□□□□ -1.39
TMEM39A-212ENST00000497993 MTCL1Q9Y4B5 1905 aaKnown RBP6.38□□□□□ -1.39
TMEM39A-212ENST00000497993 A0A088AWK7 358 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms