RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 STILQ15468 1287 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 CNGA2Q16280 664 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 ANO4Q32M45 955 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 PREPLQ4J6C6 727 aaPredicted RBP16.09■□□□□ 0.17
NUP50-219ENST00000497960 MIB1Q86YT6 1006 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 SIX6OS1Q8N1H7 587 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 RBBP8NLQ8NC74 664 aaPredicted RBP16.09■□□□□ 0.17
NUP50-219ENST00000497960 RNF214Q8ND24 703 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
NUP50-219ENST00000497960 WBP2Q969T9 261 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 ANP32EQ9BTT0 268 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 ULBP1Q9BZM6 244 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 NCDNQ9UBB6 729 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 STRIP2Q9ULQ0 834 aa16.09■□□□□ 0.17
NUP50-219ENST00000497960 TULP2O00295 520 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 HOXC11O43248 304 aaPredicted RBP16.08■□□□□ 0.16
NUP50-219ENST00000497960 ATP1A3P13637 1013 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 KRT5P13647 590 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 SLC6A11P48066 632 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
NUP50-219ENST00000497960 SEC13P55735 322 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 COG7P83436 770 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 DMWDQ09019 674 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 ADIGQ0VDE8 80 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 EFEMP1Q12805 493 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 VWA3BQ502W6 1294 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 PM20D1Q6GTS8 502 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 PRR23BQ6ZRT6 265 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 SYT13Q7L8C5 426 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 CAMKK1Q8N5S9 505 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 KCTD13Q8WZ19 329 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 TFAP2BQ92481 460 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 FAM81BQ96LP2 452 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 CRACR2AQ9BSW2 395 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 VPS16Q9H269 839 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 HSD3B7Q9H2F3 369 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 UBE2TQ9NPD8 197 aaPredicted RBP16.08■□□□□ 0.16
NUP50-219ENST00000497960 ARHGEF4Q9NR80 690 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 LIMA1Q9UHB6 759 aaKnown RBP16.08■□□□□ 0.16
NUP50-219ENST00000497960 ZNF510Q9Y2H8 683 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 VPS13AQ96RL7 3174 aa16.08■□□□□ 0.16
NUP50-219ENST00000497960 CCDC163A0A0D9SF12 145 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 K7EQS6 105 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 M0QYV0 167 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
NUP50-219ENST00000497960 GREM1O60565 184 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 KAT7O95251 611 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 BRD2P25440 801 aaKnown RBP16.07■□□□□ 0.16
NUP50-219ENST00000497960 GRIA2P42262 883 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 SIM2Q14190 667 aaPredicted RBP16.07■□□□□ 0.16
NUP50-219ENST00000497960 DMC1Q14565 340 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 PKDCCQ504Y2 493 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 C2orf27AQ580R0 203 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 MIIPQ5JXC2 388 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 GBP6Q6ZN66 633 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 NUDT18Q6ZVK8 323 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 ENOSF1Q7L5Y1 443 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 WDR5BQ86VZ2 330 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 TMEM25Q86YD3 366 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 USP33Q8TEY7 942 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 DCLK3Q9C098 648 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 CNGB3Q9NQW8 809 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 MARCH2Q9P0N8 246 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 WDR35Q9P2L0 1181 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 DEC1Q9P2X7 70 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 GMEB2Q9UKD1 530 aa16.07■□□□□ 0.16
NUP50-219ENST00000497960 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUP50-219ENST00000497960 SDK1Q7Z5N4 2213 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 HRO43593 1189 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 STC2O76061 302 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 LCP1P13796 627 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 ZNF132P52740 706 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 MFAP3P55082 362 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 MRPS21P82921 87 aaKnown RBP16.06■□□□□ 0.16
NUP50-219ENST00000497960 KDSRQ06136 332 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 TPGS1Q6ZTW0 290 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 CEP68Q76N32 757 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 RNF139Q8WU17 664 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 SLC35F5Q8WV83 523 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 NDRG1Q92597 394 aaKnown RBP16.06■□□□□ 0.16
NUP50-219ENST00000497960 XPO6Q96QU8 1125 aaKnown RBP16.06■□□□□ 0.16
NUP50-219ENST00000497960 HHIPQ96QV1 700 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 BBS2Q9BXC9 721 aa16.06■□□□□ 0.16
NUP50-219ENST00000497960 OLA1Q9NTK5 396 aaKnown RBP16.06■□□□□ 0.16
NUP50-219ENST00000497960 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 SLC12A8A0AV02 714 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 GTPBP10A4D1E9 387 aaKnown RBP16.05■□□□□ 0.16
NUP50-219ENST00000497960 TBC1D3BA6NDS4 549 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 NEDD8-MDP1E9PL57 170 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 TULP3O75386 442 aa16.05■□□□□ 0.16
NUP50-219ENST00000497960 APBB3O95704 486 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms