RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 P4HA2O15460 535 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 ALDH1B1P30837 517 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CDKL1Q00532 357 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 BNIP3Q12983 259 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 BTG3Q14201 252 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 MAPK11Q15759 364 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 TFDP3Q5H9I0 405 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 SAPCD2Q86UD0 394 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 UNC5BQ8IZJ1 945 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 TNS4Q8IZW8 715 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PCDH20Q8N6Y1 951 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 SNX31Q8N9S9 440 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PIWIL2Q8TC59 973 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 GPATCH1Q9BRR8 931 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 SENP6Q9GZR1 1112 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 TRPC5Q9UL62 973 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 SSX2IPQ9Y2D8 614 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 WDR37Q9Y2I8 494 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PCDHB2Q9Y5E7 798 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 GRAP2O75791 330 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 MT-CO1P00395 513 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 THRAP10827 490 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CDH2P19022 906 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 MAP4P27816 1152 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 EMP3P54852 163 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 GNA12Q03113 381 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 KLF1Q13351 362 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 TRMT10BQ6PF06 316 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CES3Q6UWW8 571 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZNF410Q86VK4 478 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 NAT16Q8N8M0 369 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 NETO2Q8NC67 525 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CYGBQ8WWM9 190 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 RMND5BQ96G75 393 aaPredicted RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CIB1Q99828 191 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 IMPG2Q9BZV3 1241 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 GLT8D2Q9H1C3 349 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 KMT5AQ9NQR1 393 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 WARS2Q9UGM6 360 aaKnown RBP10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 EBF1Q9UH73 591 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PSMD13Q9UNM6 376 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 V9GYQ6 96 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PHLPP1O60346 1717 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 RNF103-CHMP3A0A140T963 221 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 TMEM221A6NGB7 291 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 APOEP02649 317 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 ITGAXP20702 1163 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CDH3P22223 829 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 NME3Q13232 169 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PACS1Q6VY07 963 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLC15A3Q8IY34 581 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 KATNAL2Q8IYT4 538 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 FAM47BQ8NA70 645 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 MAML3Q96JK9 1138 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PKP2Q99959 881 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 C17orf75Q9HAS0 396 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PARVAQ9NVD7 372 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 EPS15L1Q9UBC2 864 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 SEL1LQ9UBV2 794 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 CDC14AQ9UNH5 594 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 PLLPQ9Y342 182 aa10.97□□□□□ -0.65
TRAPPC12-223ENST00000497597 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 A0A1W2PPW3 197 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 K7EPI3 171 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 PSMD12O00232 456 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 GMNNO75496 209 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 TGDSO95455 350 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 HLA-DRAP01903 254 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 COX4I1P13073 169 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 TYK2P29597 1187 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 RELAQ04206 551 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 AP3B2Q13367 1082 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 TTC33Q6PID6 262 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 CHST15Q7LFX5 561 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 FBXW8Q8N3Y1 598 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 DQX1Q8TE96 717 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 SLC35B4Q969S0 331 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 VTI1AQ96AJ9 217 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 LENG8Q96PV6 779 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 WDR18Q9BV38 432 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 DHX35Q9H5Z1 703 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 CD209Q9NNX6 404 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 ZNF358Q9NW07 568 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 GPATCH2LQ9NWQ4 482 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 VPS51Q9UID3 782 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 EFR3BQ9Y2G0 817 aa10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 CICQ96RK0 1608 aaPredicted RBP10.96□□□□□ -0.65
TRAPPC12-223ENST00000497597 HTR3EA5X5Y0 456 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CAPN14A8MX76 684 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 AKAP10O43572 662 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 MTA2O94776 668 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 ZBED1O96006 694 aa10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 P4HBP07237 508 aaKnown RBP10.96□□□□□ -0.66
TRAPPC12-223ENST00000497597 CCDC130P13994 396 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms