RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ARIH1Q9Y4X5 557 aaPredicted RBP12.03□□□□□ -0.48
HLA-B-254ENST00000497377 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
HLA-B-254ENST00000497377 F5P12259 2224 aa12.03□□□□□ -0.48
HLA-B-254ENST00000497377 F8VZ95 297 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 SPECC1L-ADORA2AF8WAN1 911 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 NFATC1O95644 943 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 ATP1A3P13637 1013 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 CTHP32929 405 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 CLCN1P35523 988 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 PGFP49763 221 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 VCPP55072 806 aaKnown RBP12.02□□□□□ -0.49
HLA-B-254ENST00000497377 SNX16P57768 344 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 DAOAP59103 153 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 COG7P83436 770 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 UBXN2BQ14CS0 331 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
HLA-B-254ENST00000497377 EML3Q32P44 896 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 C10orf120Q5SQS8 335 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 BTBD8Q5XKL5 378 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 DENND1BQ6P3S1 775 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 BHLHA9Q7RTU4 235 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 PACS2Q86VP3 889 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 NEK11Q8NG66 645 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 FAM3CQ92520 227 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 GOLGA1Q92805 767 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 PCMTD1Q96MG8 357 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-254ENST00000497377 NOX5Q96PH1 765 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 KLF16Q9BXK1 252 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-254ENST00000497377 EBF3Q9H4W6 596 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 CBX8Q9HC52 389 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 HPS4Q9NQG7 708 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 ABCC13Q9NSE7 274 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 FAM207AQ9NSI2 230 aaPredicted RBP12.02□□□□□ -0.49
HLA-B-254ENST00000497377 GTSE1Q9NYZ3 720 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 STRIP2Q9ULQ0 834 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 SH3BP1Q9Y3L3 701 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 WNT6Q9Y6F9 365 aa12.02□□□□□ -0.49
HLA-B-254ENST00000497377 FAM170BA6NMN3 283 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 GOLGA6L19H0YKK7 550 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 TBX18O95935 607 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 CALCAP01258 141 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 LCP1P13796 627 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 ARSAP15289 507 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 RGS7P49802 495 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 POLR2FP61218 127 aaKnown RBP12.01□□□□□ -0.49
HLA-B-254ENST00000497377 TNK2Q07912 1038 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 NFKBIBQ15653 356 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 BSPRYQ5W0U4 402 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 TRIM68Q6AZZ1 485 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 HTR3DQ70Z44 454 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 RSRC2Q7L4I2 434 aaKnown RBP12.01□□□□□ -0.49
HLA-B-254ENST00000497377 TMEM110Q86TL2 294 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 SLC47A2Q86VL8 602 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 TMEM105Q8N8V8 129 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 TTC16Q8NEE8 873 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 RNF139Q8WU17 664 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 SPAG5Q96R06 1193 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 IER2Q9BTL4 223 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 FOXQ1Q9C009 403 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 ECT2Q9H8V3 914 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 ACP6Q9NPH0 428 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 ST7Q9NRC1 585 aa12.01□□□□□ -0.49
HLA-B-254ENST00000497377 LSM7Q9UK45 103 aaKnown RBP12.01□□□□□ -0.49
HLA-B-254ENST00000497377 A0A1W2PQC6 194 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 SHISA7A6NL88 538 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 YJEFN3A6XGL0 299 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 E7ENQ6 273 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 PI15O43692 258 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 SERPINC1P01008 464 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 LTFP02788 710 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 CYP11B1P15538 503 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 TARSP26639 723 aaKnown RBP12□□□□□ -0.49
HLA-B-254ENST00000497377 SOX5P35711 763 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 STAT1P42224 750 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 RPS9P46781 194 aaKnown RBP12□□□□□ -0.49
HLA-B-254ENST00000497377 KLK7P49862 253 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 JAM2P57087 298 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 PDCLQ13371 301 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 MSANTD2Q6P1R3 559 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 BEND5Q7L4P6 421 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 LUZP1Q86V48 1076 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 ZNF677Q86XU0 584 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 CCDC105Q8IYK2 499 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 ADGRG2Q8IZP9 1017 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 TMEM35BQ8NCS4 154 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 CLDN23Q96B33 292 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 DCLK3Q9C098 648 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 IRF2BPLQ9H1B7 796 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 PDCL3Q9H2J4 239 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 MARCH2Q9P0N8 246 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 ZNF510Q9Y2H8 683 aa12□□□□□ -0.49
HLA-B-254ENST00000497377 A0A1B0GTH6 734 aa11.99□□□□□ -0.49
HLA-B-254ENST00000497377 TRDMT1O14717 391 aaKnown RBP11.99□□□□□ -0.49
HLA-B-254ENST00000497377 STC2O76061 302 aa11.99□□□□□ -0.49
HLA-B-254ENST00000497377 LSM8O95777 96 aaKnown RBP11.99□□□□□ -0.49
HLA-B-254ENST00000497377 ADH1CP00326 375 aa11.99□□□□□ -0.49
HLA-B-254ENST00000497377 CCDC172P0C7W6 258 aa11.99□□□□□ -0.49
HLA-B-254ENST00000497377 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
HLA-B-254ENST00000497377 CD72P21854 359 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms