RNA–Protein interactions for RNA: ENST00000497072.1

PPM1F-209, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 159 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-209ENST00000497072 HMGB4Q8WW32 186 aa13.34□□□□□ -0.27
PPM1F-209ENST00000497072 TATDN2Q93075 761 aa13.34□□□□□ -0.27
PPM1F-209ENST00000497072 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
PPM1F-209ENST00000497072 NMUR1Q9HB89 426 aa13.34□□□□□ -0.27
PPM1F-209ENST00000497072 RASAL2Q9UJF2 1139 aa13.34□□□□□ -0.27
PPM1F-209ENST00000497072 NUDT5Q9UKK9 219 aa13.34□□□□□ -0.27
PPM1F-209ENST00000497072 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.27
PPM1F-209ENST00000497072 CEP250Q9BV73 2442 aa13.33□□□□□ -0.27
PPM1F-209ENST00000497072 TCRBV21S2A2A0A5A6 115 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 BICDL2A1A5D9 508 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 SGK1O00141 431 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 MDM4O15151 490 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 GDF9O60383 454 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CYBBP04839 570 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CD19P15391 556 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CHKAP35790 457 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 KIR2DL1P43626 348 aaPredicted RBP13.33□□□□□ -0.28
PPM1F-209ENST00000497072 DHPSP49366 369 aaPredicted RBP13.33□□□□□ -0.28
PPM1F-209ENST00000497072 PGFP49763 221 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 BCAT1P54687 386 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 RAD23BP54727 409 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CUL2Q13617 745 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CBWD6Q4V339 395 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 PPM1JQ5JR12 505 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CBWD3Q5JTY5 395 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CBWD5Q5RIA9 395 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 ARHGAP17Q68EM7 881 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 TMEM92Q6UXU6 159 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 LPCAT2Q7L5N7 544 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 ETFBKMTQ8IXQ9 262 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 CEP63Q96MT8 703 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 LRRC4Q9HBW1 653 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 OSER1Q9NX31 292 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 KIAA1257Q9ULG3 409 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 USP3Q9Y6I4 520 aa13.33□□□□□ -0.28
PPM1F-209ENST00000497072 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 KHNYNO15037 678 aaKnown RBP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 CACNG3O60359 315 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 HMBSP08397 361 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 HOXB2P14652 356 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 NTSR1P30989 418 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 DPP6P42658 865 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 DGKGP49619 791 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 TKTL1P51854 596 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 YWHAGP61981 247 aaKnown RBP eCLIP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 EFEMP1Q12805 493 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 E2F5Q15329 346 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 GOLGA7BQ2TAP0 167 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 PLA2G2CQ5R387 149 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 PMS2CLQ68D20 193 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 RNF43Q68DV7 783 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 ISM2Q6H9L7 571 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 PIGZQ86VD9 579 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 ELOA2Q8IYF1 753 aaPredicted RBP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 CHPFQ8IZ52 775 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 SPATA20Q8TB22 786 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 RNF139Q8WU17 664 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 ERCC4Q92889 916 aaPredicted RBP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 WBP2Q969T9 261 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 NT5C1BQ96P26 610 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 IPO9Q96P70 1041 aaKnown RBP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 ARID3AQ99856 593 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 OLA1Q9NTK5 396 aaKnown RBP13.32□□□□□ -0.28
PPM1F-209ENST00000497072 MARK1Q9P0L2 795 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 COQ4Q9Y3A0 265 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 EML5Q05BV3 1969 aa13.32□□□□□ -0.28
PPM1F-209ENST00000497072 DNAH14Q0VDD8 3507 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 SDK1Q7Z5N4 2213 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 XPO1O14980 1071 aaKnown RBP13.31□□□□□ -0.28
PPM1F-209ENST00000497072 STC2O76061 302 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 ZBED1O96006 694 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 VDRP11473 427 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 PMS1P54277 932 aaKnown RBP13.31□□□□□ -0.28
PPM1F-209ENST00000497072 MESP2Q0VG99 397 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 BST2Q10589 180 aaKnown RBP13.31□□□□□ -0.28
PPM1F-209ENST00000497072 LRMPQ12912 555 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 STPG1Q5TH74 334 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 KLHL10Q6JEL2 608 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 SCD5Q86SK9 330 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 ZC3H3Q8IXZ2 948 aaKnown RBP13.31□□□□□ -0.28
PPM1F-209ENST00000497072 SIX6OS1Q8N1H7 587 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 PHTF2Q8N3S3 785 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 BHMTQ93088 406 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 EDEM2Q9BV94 578 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 SMOC1Q9H4F8 434 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 ZDHHC4Q9NPG8 344 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 MARCH2Q9P0N8 246 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 STARD13Q9Y3M8 1113 aa13.31□□□□□ -0.28
PPM1F-209ENST00000497072 SLC12A8A0AV02 714 aa13.3□□□□□ -0.28
PPM1F-209ENST00000497072 ANTXRLA6NF34 631 aa13.3□□□□□ -0.28
PPM1F-209ENST00000497072 GREM1O60565 184 aa13.3□□□□□ -0.28
PPM1F-209ENST00000497072 ADAM23O75077 832 aa13.3□□□□□ -0.28
PPM1F-209ENST00000497072 FGFR1OPO95684 399 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms