RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 KBTBD13C9JR72 458 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 DNM1LO00429 736 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 TOMM70O94826 608 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 MAP3K6O95382 1288 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 FAM163BP0C2L3 166 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 C6orf222P0C671 652 aaPredicted RBP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 NPR3P17342 541 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 CA4P22748 312 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 MSH2P43246 934 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 MAGEA6P43360 314 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SCTRP47872 440 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SULT1E1P49888 294 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 YWHAZP63104 245 aaKnown RBP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SF3A3Q12874 501 aaKnown RBP eCLIP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SLC45A4Q5BKX6 768 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 TRPM8Q7Z2W7 1104 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SPATA21Q7Z572 469 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 FUKQ8N0W3 1084 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 DCAKDQ8WVC6 231 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 QKIQ96PU8 341 aaKnown RBP eCLIP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 CSPG4P5Q96PW8 444 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 CYTH2Q99418 400 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 PAIP2Q9BPZ3 127 aaKnown RBP13.55□□□□□ -0.24
GARNL3-220ENST00000496711 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 MTMR10Q9NXD2 777 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 CDY2AQ9Y6F7 541 aa13.55□□□□□ -0.24
GARNL3-220ENST00000496711 A0A1W2PPM1 405 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 MYADML2A6NDP7 307 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 CYB561D2O14569 222 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 TYROBPO43914 113 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 KPNA6O60684 536 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 DUSP11O75319 330 aaKnown RBP13.54□□□□□ -0.24
GARNL3-220ENST00000496711 GSTA1P08263 222 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 TAC1P20366 129 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 FOXN2P32314 431 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 GBP2P32456 591 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-220ENST00000496711 NR2C2P49116 596 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 GBE1Q04446 702 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 MTFR1Q15390 333 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 SLC25A52Q3SY17 297 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 SYCP2LQ5T4T6 812 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 IGDCC3Q8IVU1 814 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 DEFB106AQ8N104 65 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 MZB1Q8WU39 189 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 FAM149B1Q96BN6 582 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 PLCD4Q9BRC7 762 aa13.54□□□□□ -0.24
GARNL3-220ENST00000496711 TCRBV9S1A1TA0A576 114 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ATP2C2O75185 946 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ZWINTO95229 277 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ACAT1P24752 427 aaKnown RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 RPA3P35244 121 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ARL4AP40617 200 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 FAXCQ5TGI0 409 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 FBXW10Q5XX13 1052 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 NCBP2-AS2Q69YL0 99 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 RGS9BPQ6ZS82 235 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 HACE1Q8IYU2 909 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 KCTD13Q8WZ19 329 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 GRAMD1AQ96CP6 724 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 FAM105AQ9NUU6 356 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 RCOR3Q9P2K3 495 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 FZD10Q9ULW2 581 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ARL2BPQ9Y2Y0 163 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 USP3Q9Y6I4 520 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 CLDN5O00501 218 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 GABRDO14764 452 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 GCATO75600 419 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 KRT4P19013 534 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 MLH1P40692 756 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 MRPS5P82675 430 aaKnown RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 PDK4Q16654 411 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 MDH1BQ5I0G3 518 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 CGB2Q6NT52 195 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 CLEC20AQ6ZU45 233 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 RSPH3Q86UC2 560 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 FAM131BQ86XD5 332 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 PSTKQ8IV42 348 aaKnown RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 VPS52Q8N1B4 723 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 SIX6OS1Q8N1H7 587 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 TRPV1Q8NER1 839 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 CCDC110Q8TBZ0 833 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 MED10Q9BTT4 135 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ETNK1Q9HBU6 452 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 LRRC4Q9HBW1 653 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 PNPLA8Q9NP80 782 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 ABCF3Q9NUQ8 709 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 STAP1Q9ULZ2 295 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 SLC12A4Q9UP95 1085 aa13.53□□□□□ -0.24
GARNL3-220ENST00000496711 IQANK1A0A1B0GTG1 560 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 AVILO75366 819 aa13.52□□□□□ -0.25
GARNL3-220ENST00000496711 DNAJC8O75937 253 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-220ENST00000496711 APRTP07741 180 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms