RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 CNOT6LQ96LI5 555 aaKnown RBP12.42□□□□□ -0.42
THBS3-208ENST00000496332 KREMEN1Q96MU8 473 aa12.42□□□□□ -0.42
THBS3-208ENST00000496332 IPO9Q96P70 1041 aaKnown RBP12.42□□□□□ -0.42
THBS3-208ENST00000496332 ZSWIM1Q9BR11 485 aa12.42□□□□□ -0.42
THBS3-208ENST00000496332 DEC1Q9P2X7 70 aa12.42□□□□□ -0.42
THBS3-208ENST00000496332 TBC1D3BA6NDS4 549 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 NEDD8-MDP1E9PL57 170 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 TRIM24O15164 1050 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 AXIN1O15169 862 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 RPP40O75818 363 aaKnown RBP12.41□□□□□ -0.42
THBS3-208ENST00000496332 APBB3O95704 486 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 KLKB1P03952 638 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 RETP07949 1114 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 LCP1P13796 627 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 BRD2P25440 801 aaKnown RBP12.41□□□□□ -0.42
THBS3-208ENST00000496332 TIE1P35590 1138 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 RGS7P49802 495 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 ZNF132P52740 706 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 ADIGQ0VDE8 80 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 STILQ15468 1287 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 PREPLQ4J6C6 727 aaPredicted RBP12.41□□□□□ -0.42
THBS3-208ENST00000496332 Q6ZNB5 142 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 TPGS1Q6ZTW0 290 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.41□□□□□ -0.42
THBS3-208ENST00000496332 IRF2BP1Q8IU81 584 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 SIX6OS1Q8N1H7 587 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 ALLCQ8N6M5 410 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 GPR161Q8N6U8 529 aaKnown RBP12.41□□□□□ -0.42
THBS3-208ENST00000496332 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 SLC35F5Q8WV83 523 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 CRACR2AQ9BSW2 395 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 BBS2Q9BXC9 721 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 UBE2TQ9NPD8 197 aaPredicted RBP12.41□□□□□ -0.42
THBS3-208ENST00000496332 MARK1Q9P0L2 795 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 MARCH2Q9P0N8 246 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 WDR35Q9P2L0 1181 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 STRIP2Q9ULQ0 834 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 MMP17Q9ULZ9 603 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.41□□□□□ -0.42
THBS3-208ENST00000496332 MYO16Q9Y6X6 1858 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 DMXL1Q9Y485 3027 aa12.41□□□□□ -0.42
THBS3-208ENST00000496332 SLC12A8A0AV02 714 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 YJEFN3A6XGL0 299 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 E7ENQ6 273 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 M0QYV0 167 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 PIK3R2O00459 728 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 KLF8O95600 359 aaPredicted RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 KRT5P13647 590 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 TYRP14679 529 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 CORO1AP31146 461 aaKnown RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 KIR2DL1P43626 348 aaPredicted RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 MTIF2P46199 727 aaKnown RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 ID4P47928 161 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 SPEM2Q0P670 501 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 TPD52L1Q16890 204 aaPredicted RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 BSPRYQ5W0U4 402 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 GRAMD4Q6IC98 578 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 PMF1Q6P1K2 205 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 CLEC17AQ6ZS10 378 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 CACNA2D4Q7Z3S7 1137 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 FAM160A2Q8N612 972 aaPredicted RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 TXNDC5Q8NBS9 432 aaKnown RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 EDEM1Q92611 657 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 XPO6Q96QU8 1125 aaKnown RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 DCLK3Q9C098 648 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 ZDHHC4Q9NPG8 344 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 CNGB3Q9NQW8 809 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 DNAJC17Q9NVM6 304 aaKnown RBP12.4□□□□□ -0.42
THBS3-208ENST00000496332 EBF1Q9UH73 591 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 USP18Q9UMW8 372 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 CNTN6Q9UQ52 1028 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 ZNF510Q9Y2H8 683 aa12.4□□□□□ -0.42
THBS3-208ENST00000496332 SGK1O00141 431 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 CACNG3O60359 315 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 GABBR2O75899 941 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 SLC9A1P19634 815 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 TGM1P22735 817 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 DGKEP52429 567 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 MFAP3P55082 362 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 DAOAP59103 153 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 CRY1Q16526 586 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 DPCR1Q3MIW9 517 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 HSF5Q4G112 596 aaPredicted RBP12.39□□□□□ -0.43
THBS3-208ENST00000496332 C10orf76Q5T2E6 689 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 ANO7Q6IWH7 933 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 GJB7Q6PEY0 223 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 TRIM65Q6PJ69 517 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 GBP6Q6ZN66 633 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 NUDT18Q6ZVK8 323 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 KBTBD6Q86V97 674 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 FMNL3Q8IVF7 1028 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 SCML4Q8N228 414 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
THBS3-208ENST00000496332 RNF139Q8WU17 664 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms