RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SLC44A1Q8WWI5 657 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 PTPN18Q99952 460 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 KATNAL1Q9BW62 490 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ECT2Q9H8V3 914 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.5□□□□□ -0.57
CMSS1-208ENST00000496116 KLK14Q9P0G3 267 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 USH1CQ9Y6N9 552 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 TRDMT1O14717 391 aaKnown RBP11.49□□□□□ -0.57
CMSS1-208ENST00000496116 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
CMSS1-208ENST00000496116 FGFR1P11362 822 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 LMO2P25791 158 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 ARL4AP40617 200 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 SKIV2L2P42285 1042 aaKnown RBP11.49□□□□□ -0.57
CMSS1-208ENST00000496116 YWHAZP63104 245 aaKnown RBP11.49□□□□□ -0.57
CMSS1-208ENST00000496116 KBTBD12Q3ZCT8 623 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 SLC45A4Q5BKX6 768 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 MORN1Q5T089 497 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 SYCP2LQ5T4T6 812 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 LGSNQ5TDP6 509 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 FYB2Q5VWT5 728 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 IGDCC3Q8IVU1 814 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 NME8Q8N427 588 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 BANPQ8N9N5 519 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 MCUQ8NE86 351 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 TMEM40Q8WWA1 233 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 RMDN2Q96LZ7 410 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 LPIN3Q9BQK8 851 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 PRDM16Q9HAZ2 1276 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 ZC3H7BQ9UGR2 993 aaKnown RBP11.49□□□□□ -0.57
CMSS1-208ENST00000496116 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 GRID1Q9ULK0 1009 aa11.49□□□□□ -0.57
CMSS1-208ENST00000496116 C17orf102A2RUQ5 167 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 HAS3O00219 553 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 CHUKO15111 745 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 SPTLC1O15269 473 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 TREHO43280 583 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 HCRTO43612 131 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 MGRN1O60291 552 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 LPXNO60711 386 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 AVILO75366 819 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 GCATO75600 419 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 PIAS1O75925 651 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 DCTN3O75935 186 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 MAP3K6O95382 1288 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 GSTA2P09210 222 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 GNAT1P11488 350 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 TFE3P19532 575 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 MATKP42679 507 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 CRYBB1P53674 252 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 NCALDP61601 193 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ELF3P78545 371 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 HEATR6Q6AI08 1181 aaKnown RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 SLC26A11Q86WA9 606 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ECHDC2Q86YB7 292 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 CCDC110Q8TBZ0 833 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF75CPQ92670 426 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 AP5M1Q9H0R1 490 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 VPS11Q9H270 941 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ETNK1Q9HBU6 452 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 RNF19AQ9NV58 838 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 IPPQ9Y573 584 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ATP5HO75947 161 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 KRT37O76014 449 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 MYL3P08590 195 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF865P0CJ78 1059 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ALADP13716 330 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 TPSB2P20231 275 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 WARSP23381 471 aaKnown RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ADRA1DP25100 572 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 SARNPP82979 210 aaKnown RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 MGAT5Q09328 741 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 TPSAB1Q15661 275 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 SLC25A52Q3SY17 297 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 UBXN11Q5T124 520 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 TTC39BQ5VTQ0 682 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 OLFML2BQ68BL8 750 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 LIMS2Q7Z4I7 341 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 TBC1D1Q86TI0 1168 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 LRRC6Q86X45 466 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 PSTKQ8IV42 348 aaKnown RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 B3GALNT2Q8NCR0 500 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 PPP1R13LQ8WUF5 828 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 SPOCK2Q92563 424 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 APBB2Q92870 758 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 FAM149B1Q96BN6 582 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 KLHL29Q96CT2 875 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 CFAP36Q96G28 342 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 APOPT1Q96IL0 206 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 CSPG4P5Q96PW8 444 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 LRRC37BQ96QE4 947 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 FERMT1Q9BQL6 677 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 SLCO1B3Q9NPD5 702 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 RCOR3Q9P2K3 495 aaPredicted RBP11.48□□□□□ -0.57
CMSS1-208ENST00000496116 CPA4Q9UI42 421 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF180Q9UJW8 692 aa11.48□□□□□ -0.57
CMSS1-208ENST00000496116 HACD1B0YJ81 288 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 GOLGA8RI6L899 631 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms