RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 CELF3Q5SZQ8 465 aaKnown RBP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 GJC2Q5T442 439 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 NETO2Q8NC67 525 aa13.51□□□□□ -0.25
PTPN7-217ENST00000495688 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
PTPN7-217ENST00000495688 FDXACB1Q9BRP7 624 aaPredicted RBP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 SNRNP25Q9BV90 132 aaKnown RBP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 YIPF3Q9GZM5 350 aa13.51□□□□□ -0.25
PTPN7-217ENST00000495688 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 PPARGC1AQ9UBK2 798 aaKnown RBP13.51□□□□□ -0.25
PTPN7-217ENST00000495688 WASF2Q9Y6W5 498 aa13.51□□□□□ -0.25
PTPN7-217ENST00000495688 B2RBV5 119 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 APOL1O14791 398 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 IL18RAPO95256 599 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 GBE1Q04446 702 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 THOC5Q13769 683 aaKnown RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 ILDR2Q71H61 639 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 ZNF534Q76KX8 674 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 DEFB132Q7Z7B7 95 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 TEX9Q8N6V9 391 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 FGD4Q96M96 766 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PNPLA8Q9NP80 782 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PDGFCQ9NRA1 345 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 FAM49BQ9NUQ9 324 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 STOML1Q9UBI4 398 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 LGR5O75473 907 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 SPAG6O75602 509 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PSMG1O95456 288 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 APOEP02649 317 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PRKCHP24723 683 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PGM1P36871 562 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PSEN1P49768 467 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 AQP5P55064 265 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 SLC10A2Q12908 348 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PPP1R26Q5T8A7 1209 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 NDUFAF2Q8N183 169 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 PDCD7Q8N8D1 485 aaKnown RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 SHKBP1Q8TBC3 707 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 SCG3Q8WXD2 468 aaKnown RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 KHSRPQ92945 711 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 ANKRD27Q96NW4 1050 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 MIS12Q9H081 205 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 KLC2Q9H0B6 622 aa13.5□□□□□ -0.25
PTPN7-217ENST00000495688 BARX2Q9UMQ3 279 aaPredicted RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 RPL26L1Q9UNX3 145 aaKnown RBP13.5□□□□□ -0.25
PTPN7-217ENST00000495688 CCDC189A1A4V9 331 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 SPDYE5A6NIY4 337 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 I3L4J1 428 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 LIN7AO14910 233 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 GABBR2O75899 941 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 VTNP04004 478 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 YY1P25490 414 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 VHLP40337 213 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 CRADDP78560 199 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 KRT72Q14CN4 511 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 GOLGA7BQ2TAP0 167 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 NAIF1Q69YI7 327 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 GADL1Q6ZQY3 521 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 TTC30AQ86WT1 665 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 NUDCD3Q8IVD9 361 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 RBM15BQ8NDT2 890 aaKnown RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 SH3TC2Q8TF17 1288 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 FAM161BQ96MY7 647 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 EBF4Q9BQW3 602 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 GBA2Q9HCG7 927 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 MFHAS1Q9Y4C4 1052 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 SCN1AP35498 2009 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 CAPN14A8MX76 684 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 KLF11O14901 512 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 HCRTO43612 131 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 GAS2O43903 313 aaKnown RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 ACADSP16219 412 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 ADORA2AP29274 412 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 ALDH18A1P54886 795 aaKnown RBP13.49□□□□□ -0.25
PTPN7-217ENST00000495688 OCRLQ01968 901 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 AMHR2Q16671 573 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 TSNAXIP1Q2TAA8 658 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 TEX44Q53QW1 395 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 SH3D19Q5HYK7 790 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 WDR78Q5VTH9 848 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 OLFML1Q6UWY5 402 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 PLPPR4Q7Z2D5 763 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 MAP7D3Q8IWC1 876 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 RTP4Q96DX8 246 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 SIGLEC10Q96LC7 697 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 MMP19Q99542 508 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 PDZD7Q9H5P4 517 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 SIRPGQ9P1W8 387 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 WDR90Q96KV7 1748 aa13.49□□□□□ -0.25
PTPN7-217ENST00000495688 LMNAP02545 664 aaKnown RBP13.48□□□□□ -0.25
PTPN7-217ENST00000495688 ARF4P18085 180 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-217ENST00000495688 HDAC4P56524 1084 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms