RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 CD19P15391 556 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 EPCAMP16422 314 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PCSK2P16519 638 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.691e-6■■■■■ 28.8
RAB11FIP3-211ENST00000495663 KCNC3Q14003 757 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CFAP221Q4G0U5 840 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SPECC1LQ69YQ0 1117 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 LLGL2Q6P1M3 1020 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 SPATA31D4Q6ZUB0 917 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CCDC149Q6ZUS6 474 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 RTL10Q7L3V2 364 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 KREMEN2Q8NCW0 462 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TTC16Q8NEE8 873 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MYLPFQ96A32 169 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CYFIP2Q96F07 1278 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 PCED1BQ96HM7 432 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 HEXIM2Q96MH2 286 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MED10Q9BTT4 135 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 EDEM3Q9BZQ6 932 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 CYP4F11Q9HBI6 524 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 ABCB6Q9NP58 842 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 MAN1C1Q9NR34 630 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 TMLHEQ9NVH6 421 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 DZANK1Q9NVP4 752 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 HSFX1Q9UBD0 423 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 KIAA1257Q9ULG3 409 aa10.71□□□□□ -0.69
RAB11FIP3-211ENST00000495663 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■■□□ 19.1
RAB11FIP3-211ENST00000495663 PATJQ8NI35 1801 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 GOLGA6L3A6NEY3 463 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 FOXN3O00409 490 aaPredicted RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 PRRG1O14668 218 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 RPLP1P05386 114 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 C8AP07357 584 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CCDC130P13994 396 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 GNA15P30679 374 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 SOX5P35711 763 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 STAT1P42224 750 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 TUFMP49411 452 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ZNF75DP51815 510 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ZNF132P52740 706 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 JAM2P57087 298 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 BPIFB4P59827 614 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 DUSP4Q13115 394 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ADAM15Q13444 863 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 TRIM14Q14142 442 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 STILQ15468 1287 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CCDC85BQ15834 202 aaPredicted RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CCDC142Q17RM4 750 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 MGAT5BQ3V5L5 792 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 SGO2Q562F6 1265 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 TMEM184AQ6ZMB5 413 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 FMNL3Q8IVF7 1028 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 VSTM4Q8IW00 320 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 TCEAL8Q8IYN2 117 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 FAM71AQ8IYT1 594 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 C12orf29Q8N999 325 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ATAD1Q8NBU5 361 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ZNF397Q8NF99 534 aaPredicted RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 PABPC5Q96DU9 382 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 MRFAP1L1Q96HT8 127 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 FAM46AQ96IP4 442 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 HNRNPABQ99729 332 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 B3GNT5Q9BYG0 378 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 TTYH3Q9C0H2 523 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 GPR88Q9GZN0 384 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CHRDQ9H2X0 955 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 C7orf69Q9H7B7 122 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 FAM49BQ9NUQ9 324 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CLDND1Q9NY35 253 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 MYO6Q9UM54 1294 aa10.7□□□□□ -0.7
RAB11FIP3-211ENST00000495663 GREB1Q4ZG55 1949 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 A0A1W2PQJ5 194 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 PDE2AO00408 941 aaPredicted RBP10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 LINC01565O15544 149 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CYP26A1O43174 497 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 MED7O43513 233 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 GFPT2O94808 682 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 SEC24AO95486 1093 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 VNN2O95498 520 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 GLP2RO95838 553 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 LRG1P02750 347 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 TPM1P09493 284 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CCDC172P0C7W6 258 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 PNMA6AP0CW24 399 aaPredicted RBP10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 HAPLN1P10915 354 aaPredicted RBP10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 BDNFP23560 247 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CYP2F1P24903 491 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 MZF1P28698 734 aaPredicted RBP10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ADORA2BP29275 332 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 HOXA9P31269 272 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 MAGEA11P43364 429 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ALDH1A3P47895 512 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 CDR1P51861 262 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 RPL10AP62906 217 aaKnown RBP10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 RBM10P98175 930 aaKnown RBP10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 PLD1Q13393 1074 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 PPM1LQ5SGD2 360 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 HGSNATQ68CP4 663 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 ARHGAP17Q68EM7 881 aa10.69□□□□□ -0.7
RAB11FIP3-211ENST00000495663 VSTM1Q6UX27 236 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms