RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 GMEB2Q9UKD1 530 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 RAB23Q9ULC3 237 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.15□□□□□ -0.62
NELFE-213ENST00000494956 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.15□□□□□ -0.62
NELFE-213ENST00000494956 ZNF292O60281 2723 aa11.15□□□□□ -0.62
NELFE-213ENST00000494956 SPTBN4Q9H254 2564 aa11.15□□□□□ -0.63
NELFE-213ENST00000494956 THADAQ6YHU6 1953 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 SLC12A8A0AV02 714 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 PRRT4C9JH25 899 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 XPO1O14980 1071 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 ADAM23O75077 832 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 RPP40O75818 363 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 ZBED1O96006 694 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 AFPP02771 609 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 CCDC192P0DO97 292 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 RALAP11233 206 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 LCP1P13796 627 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 TYRP14679 529 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 TBXAS1P24557 533 aaPredicted RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 PLA2G4AP47712 749 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 DGKEP52429 567 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 YWHAEP62258 255 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 BST2Q10589 180 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 RSPO4Q2I0M5 234 aaPredicted RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 HSP90AA4PQ58FG1 418 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 LAIR1Q6GTX8 287 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 ANO7Q6IWH7 933 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 PMF1Q6P1K2 205 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 IRF2BP1Q8IU81 584 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 TTC39CQ8N584 583 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 FRMD1Q8N878 549 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 KIAA1958Q8N8K9 716 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 GAB3Q8WWW8 586 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 EXOC4Q96A65 974 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 ACDQ96AP0 544 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 OTUB2Q96DC9 234 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 CNOT6LQ96LI5 555 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 ACOX2Q99424 681 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 BBS2Q9BXC9 721 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 INTS2Q9H0H0 1204 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 LRRC4Q9HBW1 653 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 ACP6Q9NPH0 428 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 DNAJC17Q9NVM6 304 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 HESX1Q9UBX0 185 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 SFMBT1Q9UHJ3 866 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 LSM7Q9UK45 103 aaKnown RBP11.14□□□□□ -0.63
NELFE-213ENST00000494956 MMP17Q9ULZ9 603 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 DMXL1Q9Y485 3027 aa11.14□□□□□ -0.63
NELFE-213ENST00000494956 TBC1D3BA6NDS4 549 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 YJEFN3A6XGL0 299 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 E7ENQ6 273 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 M0QYV0 167 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 PMM2O15305 246 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 HOXC11O43248 304 aaPredicted RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 MSI1O43347 362 aaKnown RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 APBB3O95704 486 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 SLC9A1P19634 815 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 BCKDHBP21953 392 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 CORO1AP31146 461 aaKnown RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 EIF2DP41214 584 aaKnown RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 GRIA2P42262 883 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 PSEN1P49768 467 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 MARSP56192 900 aaKnown RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 CRY1Q16526 586 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 DPCR1Q3MIW9 517 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 C10orf76Q5T2E6 689 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 BTBD8Q5XKL5 378 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 PM20D1Q6GTS8 502 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 KLHDC10Q6PID8 442 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 LCLAT1Q6UWP7 414 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 RSRC2Q7L4I2 434 aaKnown RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 DENND1CQ8IV53 801 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 CAMKK1Q8N5S9 505 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 TRIML1Q8N9V2 468 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 MDGA1Q8NFP4 955 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 TSTD1Q8NFU3 115 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 RLN3Q8WXF3 142 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 UBXN6Q9BZV1 441 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 ARRDC1-AS1Q9H2J1 176 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 CLSTN2Q9H4D0 955 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 UBE2TQ9NPD8 197 aaPredicted RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 CLIC5Q9NZA1 410 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 MARCH2Q9P0N8 246 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 RWDD2AQ9UIY3 292 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 AJAP1Q9UKB5 411 aaPredicted RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 AGO1Q9UL18 857 aaKnown RBP11.13□□□□□ -0.63
NELFE-213ENST00000494956 CLEC4EQ9ULY5 219 aa11.13□□□□□ -0.63
NELFE-213ENST00000494956 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.13□□□□□ -0.63
NELFE-213ENST00000494956 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 P4HA2O15460 535 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 GDF9O60383 454 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 RETP07949 1114 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 PAEPP09466 180 aa11.12□□□□□ -0.63
NELFE-213ENST00000494956 CISD3P0C7P0 127 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms