RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	SLC8A2	Q9UPR5	921 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	ATG2B	Q96BY7	2078 aa		10.79	□□□□□ -0.68
NEPRO-222	ENST00000494891	EML5	Q05BV3	1969 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	TULP2	O00295	520 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	TULP3	O75386	442 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	LATS1	O95835	1130 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	APOD	P05090	189 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	CD19	P15391	556 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	TGM1	P22735	817 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	CHKA	P35790	457 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	FNTB	P49356	437 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	DMWD	Q09019	674 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	DMC1	Q14565	340 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	TRIP4	Q15650	581 aa	Predicted RBP	10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	BTBD8	Q5XKL5	378 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	MSANTD2	Q6P1R3	559 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	GBP6	Q6ZN66	633 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	NUDT18	Q6ZVK8	323 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	BEND5	Q7L4P6	421 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	RASSF3	Q86WH2	238 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	C12orf40	Q86WS4	652 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	TMEM25	Q86YD3	366 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	FAM114A1	Q8IWE2	563 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	CPXM2	Q8N436	756 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	RBBP8NL	Q8NC74	664 aa	Predicted RBP	10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	TTC16	Q8NEE8	873 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	GAB3	Q8WWW8	586 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	KAT5	Q92993	513 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	PLD4	Q96BZ4	506 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	LOXL4	Q96JB6	756 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	ZC3H10	Q96K80	434 aa	Known RBP	10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	ULBP1	Q9BZM6	244 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	NUP62CL	Q9H1M0	184 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	LRRC4	Q9HBW1	653 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	ABCC13	Q9NSE7	274 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	DEC1	Q9P2X7	70 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	HBS1L	Q9Y450	684 aa	Known RBP	10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	PCDHB4	Q9Y5E5	795 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	SPAG17	Q6Q759	2223 aa		10.78	□□□□□ -0.68
NEPRO-222	ENST00000494891	CEP250	Q9BV73	2442 aa		10.77	□□□□□ -0.68
NEPRO-222	ENST00000494891	MYO18A	Q92614	2054 aa	Known RBP	10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	CACNA1A	O00555	2505 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	GFRA2	O00451	464 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	FOXD2	O60548	495 aa	Predicted RBP	10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	GABBR2	O75899	941 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	FBXO21	O94952	628 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	APBB3	O95704	486 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	PENK	P01210	267 aa	Predicted RBP	10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	KLKB1	P03952	638 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	RET	P07949	1114 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	GPD2	P43304	727 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	SLC6A11	P48066	632 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	DGKE	P52429	567 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	MFAP3	P55082	362 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	DAOA	P59103	153 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	ZNF445	P59923	1031 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	ADIG	Q0VDE8	80 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	MESP2	Q0VG99	397 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	EXOC3L4	Q17RC7	722 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	DPCR1	Q3MIW9	517 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	PMF1	Q6P1K2	205 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	RRAGA	Q7L523	313 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	TERB1	Q8NA31	727 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	IL17RC	Q8NAC3	791 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	SHC3	Q92529	594 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	IPO9	Q96P70	1041 aa	Known RBP	10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	XPO6	Q96QU8	1125 aa	Known RBP	10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	ARHGEF4	Q9NR80	690 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	MARCH2	Q9P0N8	246 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	APEX2	Q9UBZ4	518 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	RAB23	Q9ULC3	237 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	STRIP2	Q9ULQ0	834 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	SLC27A6	Q9Y2P4	619 aa		10.77	□□□□□ -0.69
NEPRO-222	ENST00000494891	YJEFN3	A6XGL0	299 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891		E7ENQ6	273 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	MDM4	O15151	490 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	AXIN1	O15169	862 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	SART1	O43290	800 aa	Known RBP	10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	MED7	O43513	233 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	IGLV3-27	P01718	113 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	CISD3	P0C7P0	127 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	IRF1	P10914	325 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	TYR	P14679	529 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.76	□□□□□ -0.69	3e-8	■■■■□ 26.7
NEPRO-222	ENST00000494891	PON1	P27169	355 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	ACADSB	P45954	432 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	NNT	Q13423	1086 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	SIM2	Q14190	667 aa	Predicted RBP	10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	CRY1	Q16526	586 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	MAN2A1	Q16706	1144 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	BSPRY	Q5W0U4	402 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	RNF43	Q68DV7	783 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	TRMT11	Q7Z4G4	463 aa	Known RBP	10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	C11orf74	Q86VG3	221 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	MIB1	Q86YT6	1006 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	SIX6OS1	Q8N1H7	587 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	UBA3	Q8TBC4	463 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	ZNF606	Q8WXB4	792 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	AZIN2	Q96A70	460 aa		10.76	□□□□□ -0.69
NEPRO-222	ENST00000494891	GBP4	Q96PP9	640 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms