RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	ZBTB34	Q8NCN2	500 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	IL31RA	Q8NI17	732 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	CUL5	Q93034	780 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	AGAP3	Q96P47	875 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	RTFDC1	Q9BY42	306 aa	Predicted RBP	5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	TRIM5	Q9C035	493 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZHX3	Q9H4I2	956 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	SNX15	Q9NRS6	342 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	PI4KB	Q9UBF8	816 aa		5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	G3BP2	Q9UN86	482 aa	Known RBP	5.26	□□□□□ -1.57
CCDC66-222	ENST00000494672	PRC1	O43663	620 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	HTATSF1	O43719	755 aa	Known RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	MTA2	O94776	668 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	TPPP	O94811	219 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	LDHC	P07864	332 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	TGFB3	P10600	412 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	MAGEA8	P43361	318 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	MTHFS	P49914	203 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	COPB1	P53618	953 aa	Known RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	POLG	P54098	1239 aa	Predicted RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	EPHB1	P54762	984 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	POU5F1B	Q06416	359 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	TRDN	Q13061	729 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	FHL1	Q13642	323 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	E2F5	Q15329	346 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672		Q4G0T1	1027 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	DCAF12L1	Q5VU92	463 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	MAEA	Q7L5Y9	396 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	C16orf52	Q8NHV5	167 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	DNAJB14	Q8TBM8	379 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZNF398	Q8TD17	642 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	SPSB4	Q96A44	273 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZNF396	Q96N95	335 aa	Predicted RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	EFHD1	Q9BUP0	239 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	TEX13A	Q9BXU3	409 aa	Predicted RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	CDH19	Q9H159	772 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	ATP6V0A4	Q9HBG4	840 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	RRAGD	Q9NQL2	400 aa	Predicted RBP	5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	ASIC5	Q9NY37	505 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	CDY1	Q9Y6F8	540 aa		5.25	□□□□□ -1.57
CCDC66-222	ENST00000494672	CCDC196	A0A1B0GTZ2	297 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	CAPN8	A6NHC0	703 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	MYMK	A6NI61	221 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	TRIM64C	A6NLI5	447 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	SOCS2	O14508	198 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	SRGAP2	O75044	1071 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	RNF8	O76064	485 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	RASAL1	O95294	804 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	CCDC159	P0C7I6	412 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	SKIL	P12757	684 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	CREB1	P16220	341 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	UQCRC1	P31930	480 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	SARNP	P82979	210 aa	Known RBP	5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	LMAN2	Q12907	356 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	DHX8	Q14562	1220 aa	Known RBP	5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	MAPRE1	Q15691	268 aa	Known RBP	5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	TMEM65	Q6PI78	240 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZDHHC24	Q6UX98	284 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	KRT77	Q7Z794	578 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	TTC30A	Q86WT1	665 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	FMNL3	Q8IVF7	1028 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	SVIP	Q8NHG7	77 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	STAG1	Q8WVM7	1258 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	RUNDC1	Q96C34	613 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	LZTS2	Q9BRK4	669 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	B3GNT5	Q9BYG0	378 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	TMEM60	Q9H2L4	133 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZIM2	Q9NZV7	527 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	MGAT4C	Q9UBM8	478 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	ACAD8	Q9UKU7	415 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	THRAP3	Q9Y2W1	955 aa	Known RBP	5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	AFG3L2	Q9Y4W6	797 aa		5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	DDX49	Q9Y6V7	483 aa	Known RBP	5.24	□□□□□ -1.57
CCDC66-222	ENST00000494672	LOC102723971	A0A1B0GUV8	181 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	ANKRD18B	A2A2Z9	1011 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	MBD3L4	A6NDZ8	208 aa	Predicted RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	MBD3L3	A6NE82	208 aa	Predicted RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	RASSF9	O75901	435 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	TMEM191B	P0C7N4	346 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	MYB	P10242	640 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	CLK1	P49759	484 aa	Known RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZNF132	P52740	706 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	FOXG1	P55316	489 aa	Predicted RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	SUMO3	P55854	103 aa	Predicted RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	TIRAP	P58753	221 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	WASHC5	Q12768	1159 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	LRRC41	Q15345	812 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	ZNF260	Q3ZCT1	412 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	CACHD1	Q5VU97	1274 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	SHC4	Q6S5L8	630 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	OVCH2	Q7RTZ1	564 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	TECPR1	Q7Z6L1	1165 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	CHCHD4	Q8N4Q1	142 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	NGDN	Q8NEJ9	315 aa	Known RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	OSR1	Q8TAX0	266 aa	Predicted RBP	5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	GOLGA1	Q92805	767 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	TEKT1	Q969V4	418 aa		5.23	□□□□□ -1.57
CCDC66-222	ENST00000494672	SYAP1	Q96A49	352 aa	Predicted RBP	5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms