RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 SCD5Q86SK9 330 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 TMEM173Q86WV6 379 aaPredicted RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 MAP7D3Q8IWC1 876 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 CMTR2Q8IYT2 770 aaKnown RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 ABI1Q8IZP0 508 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 ALLCQ8N6M5 410 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PLD5Q8N7P1 536 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PCDH19Q8TAB3 1148 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 GRK7Q8WTQ7 553 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 C1orf54Q8WWF1 131 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PIK3R5Q8WYR1 880 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PKNOX2Q96KN3 472 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 MED10Q9BTT4 135 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 TTPALQ9BTX7 342 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 SNRNP25Q9BV90 132 aaKnown RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 TRIM62Q9BVG3 475 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 TTLL2Q9BWV7 592 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 HEMGNQ9BXL5 484 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PPP1R12CQ9BZL4 782 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 NEUROG2Q9H2A3 272 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 USP29Q9HBJ7 922 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PCDH18Q9HCL0 1135 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 OGFRQ9NZT2 677 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 MTRRQ9UBK8 725 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 PCSK1NQ9UHG2 260 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 FBXW11Q9UKB1 542 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 LRFN2Q9ULH4 789 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 MAFFQ9ULX9 164 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 NFU1Q9UMS0 254 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 SCML2Q9UQR0 700 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 UTP11Q9Y3A2 253 aaKnown RBP7.08□□□□□ -1.28
MSH5-217ENST00000494458 PATJQ8NI35 1801 aa7.08□□□□□ -1.28
MSH5-217ENST00000494458 VWA8A3KMH1 1905 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 ESYT3A0FGR9 886 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 LRRD1A4D1F6 860 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TBKBP1A7MCY6 615 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 H0YGN5 161 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 PIK3R2O00459 728 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TRIM66O15016 1216 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 CST8O60676 142 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 PPFIA2O75334 1257 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ECEL1O95672 775 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 MYCP01106 439 aaPredicted RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 FAM153BP0C7A2 387 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TGM2P21980 687 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 CYP2F1P24903 491 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 STIP1P31948 543 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 RDXP35241 583 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 RPL21P46778 160 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 NR2C2P49116 596 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 WDR5P61964 334 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 PITX1P78337 314 aaPredicted RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 ATP11AP98196 1134 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 NRG1Q02297 640 aaPredicted RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 DSG1Q02413 1049 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 XRCC4Q13426 336 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 BYSLQ13895 437 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 DPYSQ14117 519 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TFDP2Q14188 446 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 NOMO1Q15155 1222 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 FAM153CQ494X1 144 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 SLC39A12Q504Y0 691 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 DCAF6Q58WW2 860 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ANKRD20A8PQ5CZ79 823 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 RTP2Q5QGT7 225 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 BSPRYQ5W0U4 402 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ALS2CLQ60I27 953 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 MSANTD2Q6P1R3 559 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TAS1R1Q7RTX1 841 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ADAT2Q7Z6V5 191 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 DEFB128Q7Z7B8 93 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 MON1AQ86VX9 555 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 SPATA2LQ8IUW3 424 aaPredicted RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 CCDC105Q8IYK2 499 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 SIX6OS1Q8N1H7 587 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 SLC39A11Q8N1S5 342 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 KCTD6Q8NC69 237 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ACTL9Q8TC94 416 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 SPPL2BQ8TCT7 592 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 CCHCR1Q8TD31 782 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 HASPINQ8TF76 798 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ATG4AQ8WYN0 398 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 NDRG1Q92597 394 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 DPF3Q92784 378 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 CLP1Q92989 425 aaKnown RBP7.07□□□□□ -1.28
MSH5-217ENST00000494458 SH3GL2Q99962 352 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 TRIM51Q9BSJ1 452 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 RHOBTB2Q9BYZ6 727 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 FOXP3Q9BZS1 431 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 OSBPL2Q9H1P3 480 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ADAM7Q9H2U9 754 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 EPB41L4BQ9H329 900 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ZWILCHQ9H900 591 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 IL23AQ9NPF7 189 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 ABCC13Q9NSE7 274 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 PIGVQ9NUD9 493 aa7.07□□□□□ -1.28
MSH5-217ENST00000494458 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.07□□□□□ -1.28
MSH5-217ENST00000494458 ARHGEF38Q9NXL2 777 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms