RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PAX3P23760 479 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 NOS2P35228 1153 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 SLCO1A2P46721 670 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 NDUFV1P49821 464 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 IRAK1P51617 712 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CDR1P51861 262 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 GAD2Q05329 585 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 DSC1Q08554 894 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 ERMARDQ5T6L9 678 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 NCBP2-AS2Q69YL0 99 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 TTC19Q6DKK2 380 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 C1orf228Q6PIY5 440 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CTU1Q7Z7A3 348 aaKnown RBP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 FAM131BQ86XD5 332 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CDKL3Q8IVW4 592 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 PPIL6Q8IXY8 311 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 FAM71DQ8N9W8 422 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 P3H4Q92791 437 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 NT5C3BQ969T7 300 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 TMEM209Q96SK2 561 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 RBM15Q96T37 977 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CNGB3Q9NQW8 809 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 STARD7Q9NQZ5 370 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 TMLHEQ9NVH6 421 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 EURLQ9NYK6 297 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 BCCIPQ9P287 314 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 RCOR3Q9P2K3 495 aaPredicted RBP11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 LGALS13Q9UHV8 139 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 STAP1Q9ULZ2 295 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 PCDHB8Q9UN66 801 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 MFHAS1Q9Y4C4 1052 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 CLUHO75153 1309 aa11.08□□□□□ -0.64
CLCN6-208ENST00000494028 GREB1Q4ZG55 1949 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 TCRBV7S3A2A0A539 114 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 BCLAF3A2AJT9 711 aaKnown RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 E7ESA3 106 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 H7C0C1 242 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 RASGRF2O14827 1237 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 MFSD11O43934 449 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 TCEA3O75764 348 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ZBED1O96006 694 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 FYNP06241 537 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 IVLP07476 585 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 TYMPP19971 482 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 LSP1P33241 339 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 MDH1P40925 334 aaKnown RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 MAGEA4P43358 317 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ATP5OP48047 213 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 BCAR1P56945 870 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 GUCY1A3Q02108 690 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 GBE1Q04446 702 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 KCNJ11Q14654 390 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ZSCAN26Q16670 478 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 KYNUQ16719 465 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 PPP6R3Q5H9R7 873 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 FAM171BQ6P995 826 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 DARS2Q6PI48 645 aaKnown RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 GLB1LQ6UWU2 654 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 B4GALNT4Q76KP1 1039 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 LRRC8DQ7L1W4 858 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 PCGF5Q86SE9 256 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 RTN4RL1Q86UN2 441 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ZC3H18Q86VM9 953 aaKnown RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 METTL23Q86XA0 190 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 PSTKQ8IV42 348 aaKnown RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 CCDC13Q8IYE1 715 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 PIAS4Q8N2W9 510 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 TTC25Q96NG3 672 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ACBD6Q9BR61 282 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 MAK16Q9BXY0 300 aaKnown RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 MAGEB5Q9BZ81 275 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ROPN1BQ9BZX4 212 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 ROPN1Q9HAT0 212 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 POPDC2Q9HBU9 364 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 HMX1Q9NP08 348 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 DMAP1Q9NPF5 467 aaPredicted RBP11.07□□□□□ -0.64
CLCN6-208ENST00000494028 DSEQ9UL01 958 aa11.07□□□□□ -0.64
CLCN6-208ENST00000494028 SF3B1O75533 1304 aaKnown RBP eCLIP11.07□□□□□ -0.642e-6■■■■■ 112
CLCN6-208ENST00000494028 TET1Q8NFU7 2136 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 ARHGEF37A1IGU5 675 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 SRRM3A6NNA2 597 aaPredicted RBP11.06□□□□□ -0.64
CLCN6-208ENST00000494028 YJEFN3A6XGL0 299 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 E7ENQ6 273 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 H3BRJ5 948 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 ARVCFO00192 962 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 FKTNO75072 461 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 BANF1O75531 89 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 LTFP02788 710 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 VAV1P15498 845 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 GOT1P17174 413 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 RBL1P28749 1068 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 GRK4P32298 578 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 MMP13P45452 471 aa11.06□□□□□ -0.64
CLCN6-208ENST00000494028 PRMT2P55345 433 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms