RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 MECRQ9BV79 373 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 CCDC134Q9H6E4 229 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 TMLHEQ9NVH6 421 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 AURKAIP1Q9NWT8 199 aaPredicted RBP6.94□□□□□ -1.3
SMC2-205ENST00000493955 DNAJC16Q9Y2G8 782 aa6.94□□□□□ -1.3
SMC2-205ENST00000493955 A1L4Q6 167 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 SLC38A8A6NNN8 435 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 PSMD9O00233 223 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 KIAA0355O15063 1070 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 SLC16A3O15427 465 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 TBX18O95935 607 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 ERBB2P04626 1255 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 ITIH3Q06033 890 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 EIF2B5Q13144 721 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 PDCLQ13371 301 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 TBRG1Q3YBR2 411 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 ZNF569Q5MCW4 686 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 TEDDM1Q5T9Z0 273 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 ATG16L1Q676U5 607 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 KRT27Q7Z3Y8 459 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 RAB11FIP4Q86YS3 637 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 TMPRSS6Q8IU80 811 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 TCP11L2Q8N4U5 519 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 CPEB3Q8NE35 698 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 OVCA2Q8WZ82 227 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 FUBP1Q96AE4 644 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 ADAM2Q99965 735 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 REEP2Q9BRK0 252 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 OSBPL5Q9H0X9 879 aaPredicted RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 ABHD16BQ9H3Z7 469 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 SERHL2Q9H4I8 314 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 ZCCHC4Q9H5U6 513 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 ALG13Q9NP73 1137 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 ZBTB1Q9Y2K1 713 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 UBE2J1Q9Y385 318 aaPredicted RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 SETD1BQ9UPS6 1966 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 A8MVJ9 347 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 STX16-NPEPL1H3BU86 382 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 STX16O14662 325 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 TSPAN3O60637 253 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 FAM20BO75063 409 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 NDUFA10O95299 355 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 HNRNPA1P09651 372 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMC2-205ENST00000493955 BMPR1AP36894 532 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 HNRNPMP52272 730 aaKnown RBP eCLIP6.93□□□□□ -1.3
SMC2-205ENST00000493955 DGKQP52824 942 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 AASDHQ4L235 1098 aaPredicted RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 FAM90A2PQ658T7 463 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 CCDC144NLQ6NUI1 221 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 MZT2BQ6NZ67 158 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 MAVSQ7Z434 540 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 SSH3Q8TE77 659 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 LPIN2Q92539 896 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 REXO5Q96IC2 774 aaKnown RBP6.93□□□□□ -1.3
SMC2-205ENST00000493955 AGXT2Q9BYV1 514 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 CD248Q9HCU0 757 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 FBXO28Q9NVF7 368 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 IRAK4Q9NWZ3 460 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 BAG5Q9UL15 447 aa6.93□□□□□ -1.3
SMC2-205ENST00000493955 LOC105369274A0A096LPK9 316 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 LOC102723532A0A0G2JNH3 316 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 CYP21A2P08686 494 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 LIPAP38571 399 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.92□□□□□ -1.3
SMC2-205ENST00000493955 SEMA3BQ13214 749 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 KCNJ12Q14500 433 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 OR4N4Q8N0Y3 316 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 MYCBPAPQ8TBZ2 947 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 ST8SIA4Q92187 359 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 R3HDM4Q96D70 268 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 ZBTB10Q96DT7 871 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 KTI12Q96EK9 354 aaPredicted RBP6.92□□□□□ -1.3
SMC2-205ENST00000493955 WDYHV1Q96HA8 205 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 KCNK9Q9NPC2 374 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 RXFP3Q9NSD7 469 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 ARHGAP26Q9UNA1 814 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 TCAF1Q9Y4C2 921 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 PCDHB7Q9Y5E2 793 aa6.92□□□□□ -1.3
SMC2-205ENST00000493955 VWA3AA6NCI4 1184 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 SEPT4O43236 478 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 RNASEH2AO75792 299 aaKnown RBP6.91□□□□□ -1.3
SMC2-205ENST00000493955 ITGB3P05106 788 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 HSP90AA1P07900 732 aaKnown RBP6.91□□□□□ -1.3
SMC2-205ENST00000493955 THBS4P35443 961 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 SELENOPP49908 381 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 CLCN2P51788 898 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 NXPH1P58417 271 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 RNASELQ05823 741 aaKnown RBP6.91□□□□□ -1.3
SMC2-205ENST00000493955 BFSP2Q13515 415 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 NFIXQ14938 502 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 L1TD1Q5T7N2 865 aaKnown RBP6.91□□□□□ -1.3
SMC2-205ENST00000493955 RASGRP2Q7LDG7 609 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.91□□□□□ -1.3
SMC2-205ENST00000493955 FKBP10Q96AY3 582 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 PTCD3Q96EY7 689 aaKnown RBP6.91□□□□□ -1.3
SMC2-205ENST00000493955 VPS50Q96JG6 964 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 FAR2Q96K12 515 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 DEF6Q9H4E7 631 aa6.91□□□□□ -1.3
SMC2-205ENST00000493955 PREBQ9HCU5 417 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms