RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 WDR35Q9P2L0 1181 aa17.6■□□□□ 0.41
NECAB3-214ENST00000493590 ANKRD6Q9Y2G4 727 aa17.6■□□□□ 0.41
NECAB3-214ENST00000493590 HECTD1Q9ULT8 2610 aa17.6■□□□□ 0.41
NECAB3-214ENST00000493590 PTPRJQ12913 1337 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 SYNCRIPO60506 623 aaKnown RBP17.59■□□□□ 0.41
NECAB3-214ENST00000493590 RTN3O95197 1032 aaPredicted RBP17.59■□□□□ 0.41
NECAB3-214ENST00000493590 GNL1P36915 607 aaPredicted RBP17.59■□□□□ 0.41
NECAB3-214ENST00000493590 UBA7P41226 1012 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 CCDC173Q0VFZ6 552 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 TEAD4Q15561 434 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 MCTP1Q6DN14 999 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 PCSK4Q6UW60 755 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 ZNF720Q7Z2F6 126 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 SCAMP5Q8TAC9 235 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 NUP58Q9BVL2 599 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 ST6GALNAC4Q9H4F1 302 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 PCIF1Q9H4Z3 704 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 EXOC7Q9UPT5 735 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 NME7Q9Y5B8 376 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 CABIN1Q9Y6J0 2220 aa17.59■□□□□ 0.41
NECAB3-214ENST00000493590 CAPN8A6NHC0 703 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 H0Y8X5 98 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 CBX4O00257 560 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 TNNC2P02585 160 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
NECAB3-214ENST00000493590 IL12RB1P42701 662 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 HMGN5P82970 282 aaKnown RBP17.58■□□□□ 0.4
NECAB3-214ENST00000493590 TARDBPQ13148 414 aaKnown RBP eCLIP17.58■□□□□ 0.42e-6■■■■□ 22.1
NECAB3-214ENST00000493590 INAVAQ3KP66 663 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 DYMQ7RTS9 669 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 LIMS2Q7Z4I7 341 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 OR5B17Q8NGF7 314 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 C1orf216Q8TAB5 229 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 OVCA2Q8WZ82 227 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 HVCN1Q96D96 273 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 KCNK16Q96T55 309 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 MRPL44Q9H9J2 332 aaKnown RBP17.58■□□□□ 0.4
NECAB3-214ENST00000493590 KNL1Q8NG31 2342 aa17.58■□□□□ 0.4
NECAB3-214ENST00000493590 LDHAP00338 332 aaKnown RBP17.57■□□□□ 0.4
NECAB3-214ENST00000493590 CISD3P0C7P0 127 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 DNAJC3Q13217 504 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 ADAT2Q7Z6V5 191 aaKnown RBP17.57■□□□□ 0.4
NECAB3-214ENST00000493590 SYCP3Q8IZU3 236 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 FAM181AQ8N9Y4 354 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 IGSF8Q969P0 613 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 ACCSQ96QU6 501 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 CBWD1Q9BRT8 395 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 B3GNT5Q9BYG0 378 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 C6orf106Q9H6K1 298 aaPredicted RBP17.57■□□□□ 0.4
NECAB3-214ENST00000493590 LSM7Q9UK45 103 aaKnown RBP17.57■□□□□ 0.4
NECAB3-214ENST00000493590 LIMCH1Q9UPQ0 1083 aa17.57■□□□□ 0.4
NECAB3-214ENST00000493590 PCDHGA12O60330 932 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 TUBP50607 506 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 SLC5A3P53794 718 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 CDH8P55286 799 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 RILPL1Q5EBL4 403 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 HES3Q5TGS1 186 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 USP49Q70CQ1 688 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 HTR3DQ70Z44 454 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 GATAD2AQ86YP4 633 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 DUSP9Q99956 384 aaKnown RBP17.56■□□□□ 0.4
NECAB3-214ENST00000493590 MED10Q9BTT4 135 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 TM9SF3Q9HD45 589 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.56■□□□□ 0.49e-8■■■■■ 149.4
NECAB3-214ENST00000493590 INTS13Q9NVM9 706 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 MARK1Q9P0L2 795 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 MYH10P35580 1976 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 TP53BP1Q12888 1972 aaPredicted RBP17.56■□□□□ 0.4
NECAB3-214ENST00000493590 MYLKQ15746 1914 aa17.56■□□□□ 0.4
NECAB3-214ENST00000493590 KNTC1P50748 2209 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.55■□□□□ 0.4
NECAB3-214ENST00000493590 ERVH48-1M5A8F1 160 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 ENC1O14682 589 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 TLR5O60602 858 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 RFPL3O75679 317 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 PPP1R37O75864 691 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 PRPF6O94906 941 aaKnown RBP17.55■□□□□ 0.4
NECAB3-214ENST00000493590 GCNT3O95395 438 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 TBX18O95935 607 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 KCNC4Q03721 635 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 TLE3Q04726 772 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 KCNT1Q5JUK3 1230 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 L1TD1Q5T7N2 865 aaKnown RBP17.55■□□□□ 0.4
NECAB3-214ENST00000493590 SNIP1Q8TAD8 396 aaKnown RBP17.55■□□□□ 0.4
NECAB3-214ENST00000493590 LARP4BQ92615 738 aaKnown RBP17.55■□□□□ 0.4
NECAB3-214ENST00000493590 FGF11Q92914 225 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 CNDP2Q96KP4 475 aaKnown RBP17.55■□□□□ 0.4
NECAB3-214ENST00000493590 AK8Q96MA6 479 aa17.55■□□□□ 0.4
NECAB3-214ENST00000493590 NUMA1Q14980 2115 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 ATMQ13315 3056 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 A8MXQ7 604 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 BRINP1O60477 761 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 GREM1O60565 184 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 FSBPO95073 299 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 GARTP22102 1010 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 PRKCHP24723 683 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 ACSL1P33121 698 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 GRIA4P48058 902 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 PGFP49763 221 aa17.54■□□□□ 0.4
NECAB3-214ENST00000493590 COPAP53621 1224 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms