RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	PRKCG	P05129	697 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CXCL8	P10145	99 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	MBL2	P11226	248 aa	Predicted RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	PRF1	P14222	555 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CPA1	P15085	419 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	PFKL	P17858	780 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CYP3A5	P20815	502 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CD38	P28907	300 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	ADD1	P35611	737 aa	Known RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	RXRG	P48443	463 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	ZNF132	P52740	706 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	ZNF211	Q13398	564 aa	Predicted RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	PPP2R5A	Q15172	486 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	NFE2	Q16621	373 aa	Predicted RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	BORA	Q6PGQ7	559 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	VASH2	Q86V25	355 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	DDX42	Q86XP3	938 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	SCN4B	Q8IWT1	228 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	BBS7	Q8IWZ6	715 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	WDR36	Q8NI36	951 aa	Known RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	MAPK15	Q8TD08	544 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	HAS1	Q92839	578 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	OTUB2	Q96DC9	234 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	IFT74	Q96LB3	600 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	HSD17B14	Q9BPX1	270 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	TARS2	Q9BW92	718 aa	Known RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	MRPL4	Q9BYD3	311 aa	Known RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	LSG1	Q9H089	658 aa	Known RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	POLD4	Q9HCU8	107 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	BRPF3	Q9ULD4	1205 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	NAP1L2	Q9ULW6	460 aa	Predicted RBP	5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	SH3BP1	Q9Y3L3	701 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	ENTPD2	Q9Y5L3	495 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	MED13L	Q71F56	2210 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	NUMA1	Q14980	2115 aa		5.74	□□□□□ -1.49
SEC13-219	ENST00000492602	PDZD2	O15018	2839 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602		A0A1W2PPC4	97 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ZNF840P	A6NDX5	716 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC27A2	O14975	620 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	XPOT	O43592	962 aa	Known RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	IGHV4-34	P06331	123 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	EPHX1	P07099	455 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ITGA2B	P08514	1039 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	CKMT1A	P12532	417 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	TYR	P14679	529 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	WT1	P19544	449 aa	Predicted RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	SLC5A2	P31639	672 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	MLLT3	P42568	568 aa	Predicted RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	DGKG	P49619	791 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	CDH8	P55286	799 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	MYL7	Q01449	175 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	TSPY1	Q01534	308 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	AKAP17A	Q02040	695 aa	Known RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ZBTB6	Q15916	424 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ADCK5	Q3MIX3	580 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	WSCD1	Q658N2	575 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	KIAA0895L	Q68EN5	471 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	MPZL3	Q6UWV2	235 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	TPGS1	Q6ZTW0	290 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	HEATR4	Q86WZ0	1026 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	JAML	Q86YT9	394 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	FAM114A1	Q8IWE2	563 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	OXR1	Q8N573	874 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	C9orf43	Q8TAL5	461 aa	Predicted RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ARRDC3	Q96B67	414 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	GRAMD1A	Q96CP6	724 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	ZBTB45	Q96K62	511 aa	Predicted RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	PYM1	Q9BRP8	204 aa	Known RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	REPIN1	Q9BWE0	567 aa	Known RBP	5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	BBS2	Q9BXC9	721 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	LHX5	Q9H2C1	402 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	CASS4	Q9NQ75	786 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	SEPT10	Q9P0V9	454 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	TUBD1	Q9UJT1	453 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	UBE4B	O95155	1302 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	PTPRJ	Q12913	1337 aa		5.73	□□□□□ -1.49
SEC13-219	ENST00000492602	AKAP9	Q99996	3911 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	KLF18	A0A0U1RQI7	1052 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	CCDC196	A0A1B0GTZ2	297 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602		A0A1W2PR77	199 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	CCDC169	A6NNP5	214 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	TLR4	O00206	839 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	ABLIM1	O14639	778 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	RIOK3	O14730	519 aa	Known RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	WNT9A	O14904	365 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	FFAR2	O15552	330 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	PRPF3	O43395	683 aa	Known RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	CACNG3	O60359	315 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	CCNT1	O60563	726 aa	Known RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	EIF5B	O60841	1220 aa	Known RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	OLFM2	O95897	454 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	GP1BA	P07359	652 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	HMGB1	P09429	215 aa	Known RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	LIPC	P11150	499 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	XRCC6	P12956	609 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	RARG	P13631	454 aa		5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	HOXB4	P17483	251 aa	Predicted RBP	5.72	□□□□□ -1.49
SEC13-219	ENST00000492602	TGM2	P21980	687 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms